FMO09894.5prime Sequence
1004 bp (943 high quality bases) assembled on 2010-10-27
> FMO09894.5prime
CAGTCGACATGGACAACGCAAGCTCAACTTTTGGCCAGTCGGACTTCGAC
TGGGACGCCATCAACGTGGGTGACTACCAGTTGGATCACTCCCAGAACTT
TTTCGCACGGGCCAACAAGGAGAACAACAGGAGCCTCAGCAATGTTAACC
CCCTCCTGCTGTGCACCACTCCGCAGAAGATCGGCCGGGAACAGCGCGAT
GGTGACTTCGATGGCAAGCTGATTAGTGCTGGGGATCTCAAGAAGGAGTC
CCCCAAAGACACGACAGAGGCGTCCAAGGATGCACTCACTATCAAGCCCA
AAGTTGAGCCCCACGATGTGCCAGAACTCAAGTTGAAAACAGAGCTCCAG
GAGCTGGCTCAAGTGTCCCCACTTGACAACGGCCCAGAGCCGCAGGACGA
CATCAAACAAATTGTTCCGCTCAACTGGGGCAAGGATGGGGACGATGATG
AGAAGCACATGACGGAGGCCGATCAGCACTTGGTCCACCAGGAACGTCCT
CCCGGCGTCGGGGCCAAGCTCCGCCTGGAGTGGTCACCCCCACGCCACCG
CGAGCACGAGGGAGCCGGCGCCTCTGCCACATCCGCCGCCCCCAAGGCAT
ACCAGTTCAAGGACGTGTACGAGAGCAAGCGGCAGCAGGCGATGCGCAAG
CGCTCCGAGGAGGAAAGCAAGGCGCGCCAGTTCCACAGCCGACCCATGCC
CAACTTTAAGGCCATGCACAAGCGCATGAACGACCTGGCAGTCATCCACA
AAATCACCGTCCCGCGCACGCCCCGAGACGCTCAAGCACAGCCAGTCGAA
CGTGGAGCGGCGTCGTGACGACGATCCGGCCCACCAGGCGCGACTGCATC
CGGCTGGTACCCGCTCCAGACCCTTCCACCTGCGCAGCGAGCAAGCGCGT
GCGCGACCGACGCGAGTTCGACGCCGCCGTGCAGGTCAGCCTGGACAGAT
GGATGATGGAGGTAAAGACTAAATCTAGTAGCCCTGCAAGCTTTCTAGAA
CCAT
FMO09894.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:04:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mei-38-RA | 1333 | CG14781-RA | 129..1104 | 8..985 | 4705 | 99 | Plus |
| mei-38-RB | 1336 | CG14781-RB | 129..1107 | 8..985 | 4665 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:04:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1477375..1478253 | 105..985 | 4140 | 98.5 | Plus |
| X | 23542271 | X | 1477191..1477288 | 8..105 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:04:23 has no hits.
FMO09894.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:25 Download gff for
FMO09894.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ssp1-RA | 91..1081 | 1..994 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:51:58 Download gff for
FMO09894.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mei-38-RA | 122..1112 | 1..994 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:48:24 Download gff for
FMO09894.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mei-38-RA | 122..1112 | 1..994 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:24 Download gff for
FMO09894.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1477184..1477288 | 1..105 | 96 | -> | Plus |
| X | 1477376..1478251 | 106..983 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:51:58 Download gff for
FMO09894.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1371217..1371321 | 1..105 | 96 | -> | Plus |
| arm_X | 1371409..1372284 | 106..983 | 98 | <- | Plus |
