FMO09896.5prime Sequence
1070 bp (965 high quality bases) assembled on 2010-10-27
> FMO09896.5prime
CAGTCGACATGCCAATGCTGCCTACAATTGAGGAGGAGGCCAAGTTGTCC
TGGATCCGGCTAATGTGGAAATACCGCCTTCAGTTCCAGTCCATGGCCTC
GGCGTCGATTGTTTTCGTGGGCTGTGGAATGCGTTTGGCCTGGTCAATTT
TCGATACTCCTGCTGGCAAATTCTTAAACAACCATAATACCCACAATCTG
ATGATGAGCTGGTTTATTGGAGCTGCCGTAGGCGCCCTATTGGCAGCCCT
ATTTGTTCAGCGTGTCACCAAAAATGTGGCATATACCTCCAGTGGCTTCC
TGATGATTATAGCTGGCATTCTGAATGTAGTTCTTCCCCAGCATTTTCTG
GCCGCCTGCTACAGTAGCGTCAGTGTTGGTGCAGCCTATGGGCTAACCCA
GATTCAGGCACTGGTCACTGGATCCGAGGTGGCACACAAATCGATTCGAG
GAATGCTCCTCAGCTGTGAGAAGATATTCCTGTGGCTGGGGGTATGCATG
CAGGTGTTCTACACTCGCGTGTGGCACAATTTGAGGCCACTGGATACGCA
AGGATACGAGATGCACATTGATCAGTTGCATGGAATGGTGTTGGCCGGCC
TGGGGCTGGGAGCTGTTATCCTGGCACTAGCTCATCGCCTGGAGTCACCA
TTACTTCTGCTGCATCAGGAACGAGATATGGCTGTGGGTGAGACCCTGAA
AGCTCTACACGGACAATCCACCACCGAGTTGGTAAGATTACGGGAAGACT
GCAGGCAACTGCACAGCGCTCGAGATTGGGAGCGTTTTGTTGAGGCGCCG
GAAGAATCGGTGGCCGATTGGAGAGTCTGGGCCCGACGTATCCTGCCCTT
TTTCAAGGTCCTGCTACTCAGATGCTTTGCTACCCTCGCCGTGTCCTTGA
GCTATAATCGAGCATTTGTGGTCGTCAGTTGGCATGGCCTCGAATGCGAT
TTGAACTGCATGTACTGCTGGCATTCGCTGGCTTATAGCAGTGTCCTGGG
AGCTTCGTATGATTGCAGACGCAAAAAGTGTGTTCTTATCACTTTCTGCA
GCGTGTCATCTGATTGTCGT
FMO09896.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:04:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14160-RA | 2112 | CG14160-RA | 266..1313 | 9..1045 | 4945 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:04:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10087596..10088317 | 1003..285 | 3430 | 99.3 | Minus |
| 3L | 28110227 | 3L | 10088798..10088980 | 284..102 | 915 | 100 | Minus |
| 3L | 28110227 | 3L | 10089042..10089135 | 102..9 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:04:26 has no hits.
FMO09896.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:03:25 Download gff for
FMO09896.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14160-RB | 259..1326 | 1..1054 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:51:59 Download gff for
FMO09896.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14160-RA | 259..1326 | 1..1054 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:48:26 Download gff for
FMO09896.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14160-RA | 259..1326 | 1..1054 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:26 Download gff for
FMO09896.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10087533..10088317 | 285..1054 | 97 | <- | Minus |
| 3L | 10088798..10088979 | 103..284 | 100 | <- | Minus |
| 3L | 10089042..10089141 | 1..102 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:51:59 Download gff for
FMO09896.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10082142..10082241 | 1..102 | 96 | | Minus |
| arm_3L | 10080633..10081417 | 285..1054 | 97 | <- | Minus |
| arm_3L | 10081898..10082079 | 103..284 | 100 | <- | Minus |
