FMO10001.5prime Sequence
386 bp (386 high quality bases) assembled on 2010-10-30
> FMO10001.5prime
CAGTCGACATGCGCTTCCTATTCGCTCTACTTCTCAGCGTGCTCCTGTGT
CTGCTCCTGGCTCAGGAGGGCAGTAGCAGCACATCTACATCCTCGACGGC
GACCACATCCACCGACTCCTCTGCCACCACTACCACGGCTTCATCCGCCA
CCACCACTACCACCACTGCCTCCTCCGCATCCACCACGACCACTGCCTCC
TCTTCCTCCTCCTCGGCGGAGGCCAGGAGGCGCAGACGTGCTCGCCGTCG
TCGCCTGGCTCGTGAGCGCCGTCGTCGCCAGGAGCGGAGACAGCGCCAGG
AAAAGAGGAGGCGCAGGATGGAGCAGCTGCTGGTGAGGCAGCGTCGCCTG
ATCAATCAACTTCAGGGAGCAAGCTTTCTAGACCAT
FMO10001.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:10:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32453-RB | 741 | CG32453-RB | 18..377 | 9..368 | 1800 | 100 | Plus |
| CG32453-RA | 444 | CG32453-RA | 18..377 | 9..368 | 1800 | 100 | Plus |
| CG14454-RB | 445 | CG14454-RB | 17..376 | 9..368 | 1785 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:10:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22697247..22697606 | 9..368 | 1800 | 100 | Plus |
| 3L | 28110227 | 3L | 22692153..22692512 | 368..9 | 1785 | 99.7 | Minus |
| 3L | 28110227 | 3L | 22693532..22693735 | 266..63 | 665 | 90.3 | Minus |
| 3L | 28110227 | 3L | 22696024..22696227 | 63..266 | 665 | 90.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:10:36 has no hits.
FMO10001.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:23 Download gff for
FMO10001.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32453-RA | 2..368 | 1..368 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:55:03 Download gff for
FMO10001.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32453-RA | 11..377 | 1..368 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:51:08 Download gff for
FMO10001.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32453-RA | 11..377 | 1..368 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:51:08 Download gff for
FMO10001.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22692149..22692519 | 1..373 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:55:03 Download gff for
FMO10001.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22685249..22685619 | 1..373 | 98 | | Minus |
