Clone FMO10004 Report

Search the DGRC for FMO10004

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:100
Well:4
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34217-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10004.5prime Sequence

440 bp (440 high quality bases) assembled on 2010-10-30

> FMO10004.5prime
CAGTCGACATGCCAGGAAATCTGTTTCAAGTGTTACTAACTGTGGCGATC
CTGCCAGCTATTAGTTTGGCATCTAGTTCTGAAGATGGTCTGCACCATTA
CCGTGCTTCTCCAAAGCTCACGGGTCCTGTGAAGCTCCTACACGATCCCG
AGGACACCATTCTGAACACCTTGGATGGCGCTCTGGAGAAGATCTCCACC
ATCTACATGCAGGCCTTGTTCGCTGGTACCCACACCCCGGAACTGGAAGC
CCCACTCCGAGCCCTCGAAATCGAGTTGTTCGATCTGCTGGACGAGCTCT
ATAATCAGAATCGTCTCAAGGACTATATAAAGTACGAGGCGGAAGTGACG
CGACAAATGATAATCTACAACATGCTGAAGAGATTGTTTGGCTACACACA
GGAAAATGAGGCTGGATCTGTCGCAAGCTTTCTAGACCAT

FMO10004.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:10:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG34217-RA 738 CG34217-RA 112..526 8..422 2075 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:10:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8228202..8228616 422..8 2075 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:10:44 has no hits.

FMO10004.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:24 Download gff for FMO10004.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34217-RA 109..526 8..425 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:55:06 Download gff for FMO10004.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34217-RA 112..532 8..429 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:51:12 Download gff for FMO10004.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34217-RA 112..532 8..429 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:51:12 Download gff for FMO10004.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8228196..8228616 8..429 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:55:06 Download gff for FMO10004.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4115701..4116121 8..429 99   Minus