FMO10009.5prime Sequence
935 bp (935 high quality bases) assembled on 2010-10-30
> FMO10009.5prime
CAGTCGACATGGTGAACGTAACCATCTACGATGAGGCACCGCAGCTGAAG
CCCAACGAAGTACCCCAAAACATGGCCGCAGGAGCTGATACCCAACTGGA
GCACATGTGCCGTCTGCAGTTCGACTCGCCAGTGCCCCATGTGCGTCTGT
CCGGAATCGTGTGCACCATCGGACCTGCCTCCAGCAGCGTGGAGATGCTG
GAGAAGATGATGGCCACCGGCATGAACATCGCGCGCATGAACTTCTCTCA
CGGATCGCACGAGTACCATGCCGCCACCGTGGCCAATGTGCGCCAGGCGG
TGAAGAACTACTCGGCCAAGCTGGGCTACGAACACCCCGTGGCCATTGCC
CTGGACACCAAGGGGCCCGAGATCCGTACCGGTCTGATCGGAGGCAGCGG
CACCGCCGAGATTGAGCTGAAGAAGGGCGAGAAGATCAAGCTGACCACCA
ACAAGGAATTCCTGGAGAAGGGCTCTCTGGAGATTGTGTACGTGGACTAC
GAGAACATTGTCAATGTGGTGAAGCCCGGCAACCGGGTGTTCGTCGATGA
CGGTCTGATCTCACTGATTGTCCGCGAGGTAGGCAAGGATTCCCTCACCT
GCGAGGTGGAGAACGGCGGCTCTCTGGGTTCCCGCAAGGGTGTGAACCTG
CCAGGCGTGCCCGTCGATCTGCCTGCCGTCTCCGAGAAGGATAAGAGCGA
TCTGCTGTTCGGTGTGGAGCAGGAAGTGGACATGATCTTTGCTTCGTTCA
TCCGCAACGCCGCTGCTTTGACCGAGATCCGTAAGGTTCTTGGCGAGAAG
GGCCAGAACATCAAGATCATTTCCAAGATCGAGAACCAGCAGGGCATGCA
CAACCTGGACGAGATCATCGAGGCCGGTGATGGCATTATGGTGGCCGTGG
AGATCTGGGTATTGAGATTCCCGCCGAGAAGTGTT
FMO10009.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:11:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PyK-RA | 2109 | CG7070-RA | 243..1166 | 9..931 | 4580 | 99.8 | Plus |
| PyK-RB | 1958 | CG7070-RB | 132..1015 | 49..931 | 4380 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:10:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22370776..22371659 | 49..931 | 4355 | 99.8 | Plus |
| 3R | 32079331 | 3R | 22369524..22369565 | 9..50 | 210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:10:59 has no hits.
FMO10009.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:26 Download gff for
FMO10009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PyK-RA | 310..1245 | 1..935 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:55:10 Download gff for
FMO10009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PyK-RA | 236..1171 | 1..935 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:51:17 Download gff for
FMO10009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PyK-RA | 236..1171 | 1..935 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:51:17 Download gff for
FMO10009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22369517..22369565 | 1..50 | 92 | -> | Plus |
| 3R | 22370778..22371664 | 51..935 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:55:10 Download gff for
FMO10009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18195239..18195287 | 1..50 | 92 | -> | Plus |
| arm_3R | 18196500..18197386 | 51..935 | 99 | | Plus |
