FMO10010.5prime Sequence
1015 bp (1015 high quality bases) assembled on 2010-10-30
> FMO10010.5prime
CAGTCGACATGTTTCTCACAAAGAGTTCAAGTGCGCGGCACTCGTTGCTG
CTGCTTCTGTTGGCCTTTTGCTGCCTGAGCAATGCCTTTGCAGCCAAGAT
AACGAAGAAGGTCGAAAAAACGTCGGAAAAGCCAGAGGTGGAGGCTGCTG
CATCGCCAATCGAGGAGGAAAATGACGATGAAGATGCTGGCGAGGATGGT
GATGACGACGACGACGACGAGGAGGAGGAGACGGGGGAACCTGCGGTGGA
TGCGGCTGACAAAGAAGCTGCAGTAGGGGCATCGAGTAACAAGAACCCCA
ATGCAGTGCAGGCAGCCACGGATCCCACAGATCTCAGTGTCTGGGGCATG
GTTCGCACTCTGTGGGGCTGGCTTCGTAGCGATCTGAGTGAAAGCCTATT
CGGCGATGACGACGACGGGAAGCCCGCGTCCGGCAGCTCAGCTGTGGAGG
GTCGTACCTTTGGCAAAATCCGCCGTCTTCAAATGGCTTTGATACCCATT
ATCTTTAAGTTTGGCGTCCTTTCGGCTATGGTTGCCTTTCTGGTCGCCAT
TGGTATGAAGTCTCTGTTCCTGCTCAAGGTCTTAGTGGTTATGAATGCCA
TTGCCATTCTGGGAAAGTTCATTACCCTGAAGTCCAGTCTATTTGGACAG
TATGAGAACACGGCGCCGTCCTTCAATTACCCGGGCTGGAATCCTCATGC
CAAGGAGTCGTGGGGCACCACTGGATTGAGTGGTCATGGCGCTGGTCATC
CACCCAGCAAGGAGATTCACCTGCACATCCACGGAAATGCCCAGACCCAG
GCTCAGCTCGCCGGTCAGGGCTATCAGTATGAATCGCAGTCGGGTGGATG
GGCCAGTCGATCGGATCCCTATGGAGCCTATGCACCACGGGCCAATTCAC
CGATAGCCAGCCCGTGGGAGCAGTGACCGGAGAGGTGCCCAACATACGGA
TCCCATGTCCCTGCTGCCCACGAATTATCGGCGGAGACAACTCATCGTGC
AGCTTTCTAGACCAT
FMO10010.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:11:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14960-RA | 1444 | CG14960-RA | 242..1231 | 9..996 | 4840 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:11:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3275491..3276042 | 447..996 | 2600 | 98.9 | Plus |
| 3L | 28110227 | 3L | 3274044..3274480 | 11..447 | 2185 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:11:03 has no hits.
FMO10010.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:27 Download gff for
FMO10010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14960-RA | 235..1237 | 4..1003 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:55:11 Download gff for
FMO10010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14960-RA | 237..1239 | 4..1003 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:51:19 Download gff for
FMO10010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14960-RA | 237..1239 | 4..1003 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:51:19 Download gff for
FMO10010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3274042..3274480 | 8..447 | 99 | -> | Plus |
| 3L | 3275492..3276050 | 448..1003 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:55:11 Download gff for
FMO10010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3274042..3274480 | 8..447 | 99 | -> | Plus |
| arm_3L | 3275492..3276050 | 448..1003 | 98 | | Plus |
