FMO10012.5prime Sequence
765 bp (760 high quality bases) assembled on 2010-10-30
> FMO10012.5prime
CAGTCGACATGGCAACCGGCGGAAATAACTCGATCTTTGACCTCAGTCCC
AAGACCCTGGCGGCCGTGGGCGTGGGCCTGGTGGCGGTGGGCGGGGCTAG
CTTCCTACTGTACCGCCATCTGACCCGCGATGTGGTTCCCCAAAAGTGGC
GACGCGTGGGCACCGTGGAGAGGATACACTTTTTTCCGGTCAAGTCCTGT
GCCCCTATGGACATCTCGAAGCCCGGAGTGGAGTACGACTGCGATGTACT
GAGCATGTCCTTTGAGGGAATAAGGGATCGCACCTTGATGGTGGTCAATG
AAAAGAACGAAATGATCACGGCTCGGGTGTATCCGCTTATGACCCAGATC
AAGTCGAAGAAGGTGTCGCCCAGCAAGCTTGTGTTCAGCGCCCAGGACAT
GCCAGACCTGGAGCTGGACTTCGAGAAGCTGGACGGTCCTGGCAAGGATG
TGAAAACTTCCGTTTGGGGCGTTTCCATAGACGTGATGCCCTGCGGAGAT
CGGATCAACACGTGGTTCTCCCAGGCCATCCTGATGAAGGAGAGCGGCCT
CAAGCTAGTTCACTATCCCTATCCGAAACCAGTGAGATGCACCAATCCCC
GCCTAAAGTCCATGCCATTCATTAGACAGGAGGACTCGGGCACTTTTAAC
GATGCCACCAGCTTTATGCTGATGAACCTTTCGTCGGTCGCCGATCTTAA
TACTCGGTTAAAGAATCCGGTGGATGCACTGCAGTTCCGAGGTAACTTCG
AACTGAAATTGGGAT
FMO10012.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:11:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1665-RA | 1189 | CG1665-RA | 53..806 | 9..762 | 3725 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:11:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9839889..9840516 | 12..639 | 3095 | 99.5 | Plus |
2R | 25286936 | 2R | 9840583..9840707 | 638..762 | 610 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:11:06 has no hits.
FMO10012.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:27 Download gff for
FMO10012.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1665-RA | 30..793 | 1..765 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:55:14 Download gff for
FMO10012.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1665-RA | 45..808 | 1..765 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:51:21 Download gff for
FMO10012.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1665-RA | 45..808 | 1..765 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:51:21 Download gff for
FMO10012.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9839885..9840515 | 4..638 | 98 | -> | Plus |
2R | 9840584..9840709 | 639..765 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:55:14 Download gff for
FMO10012.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5727390..5728020 | 4..638 | 98 | -> | Plus |
arm_2R | 5728089..5728214 | 639..765 | 98 | | Plus |