FMO10022.5prime Sequence
698 bp (698 high quality bases) assembled on 2010-10-30
> FMO10022.5prime
CAGTCGACATGCCCCACTGCCACACAATGGTCTATATGCGAATTGTGCTA
ACAACCTTGGTGACCATTACGTGTCTGCTGGGGGACAACTTTGTGGAGCT
GACCCAGCATCCATTGCTGAAGGCCCTGGCCGACAATGCCACCCATGCGG
CCATTGGAGCACTCACGGGAATCACGTTCGCCACACAATTCTACGAGCGC
ACCTCGCAGTTGTTCGGCTGGATATTGATTTTCACCTGCTTCGTTGTGTC
ATCGTTCATTGACTTGGACCACTTTGTGGAGGCTCGTTCCCTTTATTTGG
AGGATGCCACCAATCTGTCGAAGAGGCCCTTCCTCCACTGCTCCAGCATT
ATAGTGGTTATGCTGCTGTTCTACATGTGCACCGCCTGTTTGAACTATTT
CCGGACCAGCCTAATGCTGGGATCCCTACTCTGTGCCTTCATCACACACC
ACACCAGGGACGCCGTGCGGCGGGGCTACTGGCTGTGCCCGCTAGGTCAC
ACGGACAGGATGCCCCAGCTAGCCTACATATTGACCACCATCCTGACGCC
CCATCTGCTGGGCTGCCTGCACAACGTGTGCCGCAGCGCAACCGTGCTTA
ACTTCCTGGGGCAGTACGTCAAGCTAAGCGAGGGCCAATACCGCAGCGGC
TCCACTGCCAACTATCGCTACATGCAGGTCGCAAGCTTTCTAGACCAT
FMO10022.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:11:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10866-RB | 1874 | CG10866-RB | 247..918 | 9..680 | 3360 | 100 | Plus |
| CG10866-RA | 1337 | CG10866-RA | 247..918 | 9..680 | 3360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:11:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3937016..3937395 | 680..301 | 1900 | 100 | Minus |
| 3L | 28110227 | 3L | 3937452..3937746 | 303..9 | 1475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:11:27 has no hits.
FMO10022.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:31 Download gff for
FMO10022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10866-RA | 190..870 | 1..681 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:55:25 Download gff for
FMO10022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10866-RA | 190..873 | 1..687 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:51:31 Download gff for
FMO10022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10866-RA | 241..924 | 1..687 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:51:31 Download gff for
FMO10022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3937010..3937393 | 303..687 | 99 | <- | Minus |
| 3L | 3937453..3937750 | 1..302 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:55:25 Download gff for
FMO10022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3937010..3937393 | 303..687 | 99 | <- | Minus |
| arm_3L | 3937453..3937750 | 1..302 | 98 | | Minus |
