FMO10023.5prime Sequence
491 bp (491 high quality bases) assembled on 2010-10-30
> FMO10023.5prime
CAGTCGACATGTTCAAATTCGTCGCCTTCTTCGCTTGCCTGGCTGTGGCC
GCCGCTGCCCCCGGTCTGATTGCCGAGACCCACTCGATTGTCCAGCCGGC
GATTCTTGCCAAGACTGCCTACGTGGACACCAGCGCCTCCTCGGCCATCA
CCCACCAGAGCAACGTGAACCTGGTGCGCAAGGTGCCAGTGGTCTACTCC
GCCCCGGTTGTTCATGCTGCCCCAGTGGTACATGCCGCTCCTCTGGTCAA
GACTGTGATCCCTGCCGCTCCCCTGGTCAAGACTGTGATCCCTGCCGCTC
CCGTCCTTAAGACTGTGGTCTCCTCTGCTCCTCTGGTCCACACTGTCGTC
CCAGCCGCTCCACTGGTCAAGACCGTCATCCCAGCTGCTCCGGTTATCAA
GACCGTGATCCCAGCTGCCCCTCTGGTTCACACCGTCCACAGCGCCCCAG
TTGTCTACTCCGCCTACCACAAGGCAAGCTTTCTAGACCAT
FMO10023.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:11:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13059-RA | 572 | CG13059-RA | 60..524 | 9..473 | 2325 | 100 | Plus |
| CG13059-RA | 572 | CG13059-RA | 288..398 | 327..437 | 225 | 80.2 | Plus |
| CG13059-RA | 572 | CG13059-RA | 378..488 | 237..347 | 225 | 80.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:11:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16323808..16324260 | 21..473 | 2265 | 100 | Plus |
| 3L | 28110227 | 3L | 16324020..16324175 | 263..418 | 285 | 78.8 | Plus |
| 3L | 28110227 | 3L | 16324050..16324205 | 233..388 | 285 | 78.8 | Plus |
| 3L | 28110227 | 3L | 16324024..16324134 | 327..437 | 225 | 80.2 | Plus |
| 3L | 28110227 | 3L | 16324114..16324224 | 237..347 | 225 | 80.2 | Plus |
Blast to na_te.dros performed 2014-11-26 15:11:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dnet\R1B | 2038 | Dnet\R1B NETR1B 2038bp | 1288..1328 | 261..222 | 121 | 80.5 | Minus |
FMO10023.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:31 Download gff for
FMO10023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13059-RA | 1..468 | 9..476 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:55:27 Download gff for
FMO10023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13059-RA | 60..528 | 9..477 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:51:32 Download gff for
FMO10023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13059-RA | 60..528 | 9..477 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:51:32 Download gff for
FMO10023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16323808..16324264 | 21..477 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:55:27 Download gff for
FMO10023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16316908..16317364 | 21..477 | 99 | | Plus |
