FMO10024.5prime Sequence
581 bp (581 high quality bases) assembled on 2010-10-30
> FMO10024.5prime
CAGTCGACATGGCAGGGTCCATCCGTTTCAGAATGGGTCCAATTACACTA
TTGCTTTCGATACTCTTGGTTCATAGTTGTCGAGCCGAAAAGCCGTACAG
TGTGGAGCTAAACACCTTTACGATGGACGACACCATCGAAAATCAGGAAA
ATTGGGTAGACTGGGGAACGCTGAGTATGAAAAAGGTCTCACGAAATCAA
TTTGTGGTTAGCGGAGACTTTGAATTCAAACTCAATATGGCCGATGAGCA
GAAGATTGTTCTCATGGTTTATGTCTACGATTCCAATGCCAATCAAAGGG
GTTCGATGGTAATGGCTGTTAAAAAGCCGTTCTGTCAGTTCATTAAAGAG
GATGAGGACTCGTATCCAAGCATACAAAAGGCTTCCAATTTACCGGATCA
GGATACGTGCCCATTTCCGAAAGGCAAATATACTATCGATAACTACGAAT
TGGAGACCAATTTCCTACCGGACAATGCACCCAAAGGCGACTATCTGTTG
CAGTTATCCTTGTTGGATCGTGAGGTCCCAGTAGCAGGACTTGTGGCTAC
TGTTACCCTGACTGCAAGCTTTCTAGACCAT
FMO10024.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:11:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CheA7a-RA | 721 | CG15033-RA | 10..564 | 9..563 | 2760 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:11:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7378486..7378796 | 253..563 | 1540 | 99.7 | Plus |
| X | 23542271 | X | 7378149..7378394 | 9..254 | 1230 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:11:34 has no hits.
FMO10024.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:32 Download gff for
FMO10024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA7a-RA | 1..534 | 33..567 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:55:30 Download gff for
FMO10024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA7a-RA | 1..568 | 2..568 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:51:33 Download gff for
FMO10024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA7a-RA | 1..568 | 2..568 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:51:33 Download gff for
FMO10024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7378139..7378394 | 1..254 | 98 | -> | Plus |
| X | 7378488..7378800 | 255..568 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:55:30 Download gff for
FMO10024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7272172..7272427 | 1..254 | 98 | -> | Plus |
| arm_X | 7272521..7272833 | 255..568 | 99 | | Plus |
