FMO10041.5prime Sequence
650 bp (650 high quality bases) assembled on 2010-10-30
> FMO10041.5prime
CAGTCGACATGCGTGATTATGCGTCCAACGTGATACGTTCGCATCGCTGC
CTTTGCATTTTTACGGTGCTCCAATTGACCCTAATGCTCTCGATGCTGGA
AGTTCAAATCCAAATTGACCAATCGCCGGAGCTCCAGCGACCTATGACCC
GAGTGCTTTTGGGGGCCCAACTAGGGGAGCTTGCCTGGAGTCCATTGTTT
TCCGGTTTTGCCATGGGTGCCATGTTCTACGGCTATGGTTTGATACACCT
GCCCAGCAAAGGACCCCTCGGGTGCTTCTTCTCCAGGCTGCGAACAGCTG
GCTTGTCCGTGTGGCAACAATGTAGTCCCGTGATGCTTGTGCCCTGGACC
TTGAAGGTGGCCCAGGGCCTAAGCCTATTCCCTTGCCATTTGTGGGAGTT
TCTTGCGAATGAGGTGTGCTTAGAGACCGACAATTGTCTGCAGCACGTCA
TTCTGGCTTTTGTACTGTGGATATACCTGCTAATCCTGGCCATCACTAGC
TTGGTCTCTGTTGTGAGACTCAATCTTCAGATGCTGGCTGACAGGCACAT
TCACAGCAGAGACCACGAGCTGCGGGCCTATGTACGGGGAATCAATGAAC
TTCTCGGATTTGAGATGATAATGGTCACCGAAGCAAGCTTTCTAGACCAT
FMO10041.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:12:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31867-RB | 701 | CG31867-RB | 63..686 | 9..632 | 3120 | 100 | Plus |
| CG31867-RA | 839 | CG31867-RA | 63..686 | 9..632 | 3120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:12:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11144732..11145355 | 632..9 | 3120 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 15:12:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy3 | 6973 | gypsy3 GYPSY3 6973bp | 5608..5636 | 609..637 | 109 | 86.2 | Plus |
FMO10041.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:41 Download gff for
FMO10041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31867-RA | 63..696 | 9..641 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:55:56 Download gff for
FMO10041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31867-RA | 63..696 | 9..641 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:02 Download gff for
FMO10041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31867-RA | 63..696 | 9..641 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:02 Download gff for
FMO10041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11144722..11145355 | 9..641 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:55:56 Download gff for
FMO10041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11144722..11145355 | 9..641 | 99 | | Minus |
