Clone FMO10044 Report

Search the DGRC for FMO10044

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:100
Well:44
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13324-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10044.5prime Sequence

362 bp (362 high quality bases) assembled on 2010-10-30

> FMO10044.5prime
CAGTCGACATGCGTCTTCTGCTCATCCTCTCAGTTGTCCTGGCCGTGATC
CTCGGCTGCCACGCCTACAGCGCCACCTGGGGGCGCAGGGTCAACAACGA
TTTCCTCCTCTCACGCACCAGGGAAGTTCGCAATCCGATCAAGAACAACT
ACTGGAACGTGAACGTGAACTACCCCAATGGATTCTACAACATCTCCGCC
GTGATCGTGTACGACAACTTCAAGAACAACTCTGGAGCATCTCCTAGCCT
CTATTCCGGCGGTCCGGGCTACCGCTTTGCCACCGTGAATCTTCGTGGTC
AGGTGAACCGCGGAATCGACTCCACCGTCGAGATCTGGGGTCGTGCAAGC
TTTCTAGACCAT

FMO10044.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:12:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG13324-RA 511 CG13324-RA 37..374 7..344 1690 100 Plus
CG13323-RB 2562 CG13323-RB 39..376 7..344 1300 92.3 Plus
CG13323-RA 521 CG13323-RA 39..376 7..344 1300 92.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:12:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13049283..13049620 344..7 1690 100 Minus
2R 25286936 2R 13046881..13047218 344..7 1300 92.3 Minus
Blast to na_te.dros performed on 2014-11-26 15:12:31 has no hits.

FMO10044.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:42 Download gff for FMO10044.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13324-RA 1..346 9..355 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:56:00 Download gff for FMO10044.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13324-RA 11..365 1..355 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:06 Download gff for FMO10044.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13324-RA 30..384 1..355 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:06 Download gff for FMO10044.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 13049273..13049625 1..355 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:56:00 Download gff for FMO10044.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8936778..8937130 1..355 97   Minus