Clone FMO10048 Report

Search the DGRC for FMO10048

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:100
Well:48
Vector:pMK33-CFH-BD
Associated Gene/TranscriptMkp-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10048.5prime Sequence

635 bp (635 high quality bases) assembled on 2010-10-30

> FMO10048.5prime
CAGTCGACATGATACTGCTGTATGAGCTGCAAAGGCGAATGGGCAACCTG
AGACCCACCGCCACGGTTGTGACCACCCCCACCGGTGTACGCTACATTGA
GCGAAGCACTTCATCCGTCTGCGTGGAGGACATTGCGCACTGCTCCCAGC
AACTGGATCCGCGTGAATACGGCTTTGTCGTGGATACCAAGCCGGACTCT
GTGCCCGCCTGCATTCTGAGCGACTTTCTCTACCTGGGCTCGCAGGATGC
AGTTAGCGCGGATAACATCATAAAATATAAGATAACTCACATCCTGAGTG
TCGGCATACAGACGCCCGAGGTGGAGTGGCCCTTACCCGTAAATTGTACA
TTTTTGCCCTGCCTGGATCTGCCGGAAACCAACCTGATGAACTACATCTT
GCCCGCGTCAATGGAGTTTATTGAAGATGCGCACAGATCGCAGGGTTGCG
TGCTCGTCCACTGCAACGCAGGCGTTTCGCGATCCCCCTCTGTGGTAATC
GGTTATTTAATGCAGCGCCGTGACATGTGCTACGAAGATGCATACAATCT
GGTAAAATCATGGAGACCGTGTATTCAGCCCAATGCGGGATTCATACAAC
AGTTAAAGAGGTCTGATGCAAGCTTTCTAGACCAT

FMO10048.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:12:42
Subject Length Description Subject Range Query Range Score Percent Strand
Mkp-RC 1900 CG34099-RC 1157..1765 9..617 3045 100 Plus
Mkp-RD 1603 CG34099-RD 860..1468 9..617 3045 100 Plus
Mkp-RB 1732 CG34099-RB 989..1597 9..617 3045 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:12:40
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 182657..183265 617..9 3045 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:12:41 has no hits.

FMO10048.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:44 Download gff for FMO10048.5prime
Subject Subject Range Query Range Percent Splice Strand
Mkp-RB 983..1604 5..626 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:56:04 Download gff for FMO10048.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34140-RA 983..1604 5..626 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:09 Download gff for FMO10048.5prime
Subject Subject Range Query Range Percent Splice Strand
Mkp-RB 985..1606 5..626 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:09 Download gff for FMO10048.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 182648..183269 5..626 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:56:04 Download gff for FMO10048.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 182648..183269 5..626 99   Minus