Clone FMO10051 Report

Search the DGRC for FMO10051

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:100
Well:51
Vector:pMK33-CFH-BD
Associated Gene/TranscriptLcp2-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10051.5prime Sequence

404 bp (404 high quality bases) assembled on 2010-10-30

> FMO10051.5prime
CAGTCGACATGTTCAAGTTTGTGATGATTCTCGCCGTTGTGGGAGTGGCT
ACCGCCCTAGCCCCAGTTTCCCGCTCCGATGATGTACACGCTGATGTCCT
TTCCCGATCGGACGACGTTCGTGCCGACGGATTCGACTCCAGCCTGCACA
CCTCAAACGGAATCGAGCAGGCCGCCAGCGGTGATGCCCATGGCAACATC
CACGGCAACTTCGGCTGGATCTCACCCGAGGGCGAGCACGTTGAGGTAAA
GTACGTCGCGAATGAAAACGGATACCAGCCCTCGGGAGCCTGGATCCCCA
CTCCTCCTCCAATCCCAGAGGCCATCGCCCGCGCCGTTGCCTGGCTGGAG
TCTCACCCCCCAGCACCCGAGCACCCCCGTCATCACGCAAGCTTTCTAGA
CCAT

FMO10051.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:12:52
Subject Length Description Subject Range Query Range Score Percent Strand
Lcp2-RB 927 CG8697-RB 251..630 7..386 1900 100 Plus
Lcp2-RA 540 CG8697-RA 41..420 7..386 1900 100 Plus
Lcp1-RB 1065 CG11650-RB 117..432 71..386 1295 94 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:12:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8434094..8434459 386..21 1830 100 Minus
2R 25286936 2R 8430748..8431063 386..71 1295 94 Minus
Blast to na_te.dros performed on 2014-11-26 15:12:51 has no hits.

FMO10051.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:45 Download gff for FMO10051.5prime
Subject Subject Range Query Range Percent Splice Strand
Lcp2-RA 35..420 1..386 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:56:09 Download gff for FMO10051.5prime
Subject Subject Range Query Range Percent Splice Strand
Lcp2-RA 35..420 1..386 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:15 Download gff for FMO10051.5prime
Subject Subject Range Query Range Percent Splice Strand
Lcp2-RA 35..420 1..386 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:15 Download gff for FMO10051.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8434094..8434459 21..386 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:56:09 Download gff for FMO10051.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4321599..4321964 21..386 100 <- Minus