FMO10053.5prime Sequence
701 bp (701 high quality bases) assembled on 2010-10-30
> FMO10053.5prime
CAGTCGACATGGAGGGGAATAGATCCCTTGTAGTGCTGGGCTTAATACTA
ATTTTAATACAACTTACAACTCCAACTTCAACTCCAGCTCCAACTCCACA
GCCTGCTGGAGCCGAAGAAGCTCCAGGAAACAGTACTGCAGAGGCTTCCA
AATCCTCCACAGCGTCTAAGTGCAAGTCAACTGAAATTCTATCCGAAAAT
GGCTGCGTGGATCGCGAAAACTTCCTCAACAAGATCGTGATGAGATCGTG
GAGGGATGAAGGCTTTGAAAAGGCGAAGGCCAGAGCTGGCCTGGTCGATG
GCGTAGAGTGCAGGGATGGGGAGTTGAGGACTGCATTTGGCTGCTCAAAG
CCACTGTACCCACCGCACGTGGACGTAAACCGGGTGCCAGTTCACCACAG
CAGACTAAATGGCGAACGGATTGTTCACGACAAGGGTATTTATAAACTCT
ATCACCACGTGGAAGATGTGGAACAAAAACCGATTCGAAAACCTAGAGTG
GTAGGACCTCCGATAACTGGAAACAAGCGCCCACGAAAGTACGTATTCTT
GCCGGGAAGGAGTATTGGAAAGGGACACACATGTCGGGCTAATGAGGTCC
TGGGAAGAAGGAATCGCTGCATCCATAGGAAACGGTTAGCTGGCCAACGA
CAAAATCAAACAATCGAAAACGAACAGAGTCAAGCAAGCTTTCTAGACCA
T
FMO10053.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:13:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31418-RA | 717 | CG31418-RA | 20..694 | 9..683 | 3375 | 100 | Plus |
| CG31419-RB | 774 | CG31419-RB | 194..429 | 168..403 | 625 | 84.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:12:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17283814..17284488 | 9..683 | 3375 | 100 | Plus |
| 3R | 32079331 | 3R | 17284841..17285076 | 168..403 | 625 | 84.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:12:59 has no hits.
FMO10053.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:47 Download gff for
FMO10053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31418-RA | 13..700 | 1..691 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:56:11 Download gff for
FMO10053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31418-RA | 13..700 | 1..691 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:16 Download gff for
FMO10053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31418-RA | 13..700 | 1..691 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:16 Download gff for
FMO10053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17283807..17284494 | 1..691 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:56:11 Download gff for
FMO10053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13109529..13110216 | 1..691 | 98 | | Plus |
