FMO10055.5prime Sequence
458 bp (458 high quality bases) assembled on 2010-10-30
> FMO10055.5prime
CAGTCGACATGGATTCCGTCTATCCAGCTGCACCCTTGGAGGCGCCCAAG
GGATCCGTCGAGCTGCAGGCGACACCCGAGCAACAACACCTTCTGCCACC
GGCTCCACCCAGTTACGACCAGGCCACAACCACTCCGGCTGAAACCACGG
GACCAGCTCCAGTTCCAGCGAGCACATCCACCACACAGCACACGGTCGTC
GTGGTGCCCGGTTCACCGTACGGCCCGGAGCCCATGGACGTGCAGTGCCC
GTACTGCCACAATTACGCCCGGACACGGGTCTCCTTCAAGCCCAACTCGC
GCACCCATCTGATAGCCTTGATATTATGCCTGTTCCAGTTGTACTGCTGT
GTGTGTCTGCCGTACTGCATTTCCAGTTGCATGAACACCAATCACTACTG
TGGCATGTGCGATCGTTATTTGGGCACCTACGATCGCAAAGCAAGCTTTC
TAGACCAT
FMO10055.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:13:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30273-RB | 1234 | CG30273-RB | 705..1137 | 8..440 | 2165 | 100 | Plus |
CG30269-RB | 1234 | CG30269-RB | 705..1137 | 8..440 | 2165 | 100 | Plus |
CG30269-RA | 577 | CG30269-RA | 48..480 | 8..440 | 2165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:13:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22667986..22668317 | 8..339 | 1660 | 100 | Plus |
2R | 25286936 | 2R | 22668649..22668751 | 338..440 | 515 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:13:08 has no hits.
FMO10055.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:48 Download gff for
FMO10055.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30269-RA | 45..482 | 8..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:56:15 Download gff for
FMO10055.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30269-RA | 48..485 | 8..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:20 Download gff for
FMO10055.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30269-RA | 48..485 | 8..446 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:20 Download gff for
FMO10055.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22667986..22668315 | 8..337 | 100 | -> | Plus |
2R | 22668649..22668756 | 338..446 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:56:15 Download gff for
FMO10055.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18555491..18555820 | 8..337 | 100 | -> | Plus |
arm_2R | 18556154..18556261 | 338..446 | 97 | | Plus |