FMO10056.5prime Sequence
1150 bp (1004 high quality bases) assembled on 2010-10-30
> FMO10056.5prime
CAGTCGACATGGAACCGGTGCCCATCCGGCCAAAAGCGCCGGGAGCGAGC
AACCGCGGAGCCCTGCCGCTGGCGGCGAAGAAGCCGGCCAAGAAGCGTAC
GTACCACTGCGGCGTTTGTTTTGCGGAGTTCTCTCGTCATCTGGCCGCCA
AGCGGCACGAGCAGCAGTGCTCCGTCAGGGTGAGGCGTCTTTTCGTCTGC
CCCCACTGCCTGACGCTTTTCGGCGAGGAGGCCCGGCTGGAGCGGCATCG
GGAGCGAAAGCACAACGATGGCCAGTTCCTGTGCCTGCAGTGCGGCAAGA
AGTACGCGTCAGCCACGTTTCTTTACCGTCATGTTGCCAGTTGGCACGGC
CAGCAGTCGCTGTTCTACTGCGACATGTGCACGGACAACTGCAACGACGT
TAAGACCTTTAGCGGGATGCTGGAGCTGCAGGAGCACGCCGAGGAGGTGC
ATCGCCTGCGTACCCTGAAGTCCACGGCCAGTGATGCAGACAGCCAGGTT
GATGAAATGGAGGATCTTGAGATGCTAGAGGAGAACATTGAGAACATACT
GCCCAGCATCGACTGGGACGACGATCTCACCTTTGGCTGGCCCACCGACC
TGGACAAGGAGTCGTGCATTGTGAACGCTAAGCCGAGCGTTTTCGTGTGT
CCCTTCTGCGCCAACGGATTCCCCGGCAGTCTGAGCCTGGTGCGGCACCT
GGAGCAGGTTCACGAACGCAGTGCCCTGGACTGCTGCTACTGTGGCAAGA
GCCATGGCAGCCGAGAAGCCCTGCGGTCCCATCTGCAACGTGTTCACATC
CTCTTGCGCGGTCATGTGTGCGGTATTTGCCAGGCGGACTTCGCCACTGC
TGATCACCTAAAGAAGCACGTTAACAGTCTGCACCTGGACCACCGACCGC
ATCTGTGTCCCACGTGCGAAAGAGATTCACCCAGCGGTGCCACCTCACCG
ATCACATAAAGACGGATCGCGGCCATGGACAACGGCACTTACACTGTGAA
TTCTGCTGCCGACCTTCTCCGGTCATCGATCTCGACGGATTGTGTGTGAG
ACATCCGCAGCTTCTAAACATCGTTTGCGCGCGCGGGCCAGTAATTGGCT
ATCCTAATCTGATGTCATAATCCTATCAACACTATGCCTAGGAAATTCTG
FMO10056.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:13:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7101-RA | 1454 | CG7101-RA | 73..1128 | 9..1057 | 4995 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:13:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18831218..18831740 | 485..1006 | 2470 | 99.4 | Plus |
| X | 23542271 | X | 18830663..18831143 | 9..489 | 2405 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:13:12 has no hits.
FMO10056.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:48 Download gff for
FMO10056.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7101-RA | 58..1113 | 9..1057 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:56:18 Download gff for
FMO10056.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7101-RA | 73..1128 | 9..1057 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:22 Download gff for
FMO10056.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7101-RA | 73..1128 | 9..1057 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:22 Download gff for
FMO10056.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18830663..18831143 | 9..489 | 100 | -> | Plus |
| X | 18831223..18831797 | 490..1057 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:56:18 Download gff for
FMO10056.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18724696..18725176 | 9..489 | 100 | -> | Plus |
| arm_X | 18725256..18725830 | 490..1057 | 97 | | Plus |
