FMO10062.5prime Sequence
1044 bp (1027 high quality bases) assembled on 2010-10-30
> FMO10062.5prime
CAGTCGACATGGCGGCCAGTAGCGGTGATTCCAAAATGACCCAACAGAGG
CCAGCTTTCGACTCCAATGCGATGACGCTGACGCGTTTCGTGCTGCAGGA
GCAGCGAAAGTTCAAGAGCGCCACTGGCGATCTCTCCCAGCTGCTCAACT
CCATCCAGACCGCCATCAAGGCTACATCATCCGCGGTGCGGAAGGCAGGT
ATCGCCAAGCTCCATGGATTCGCTGGCGACGTGAATGTCCAAGGCGAGGA
GGTCAAGAAACTGGACGTGCTCTCCAACGAGCTGTTCATCAACATGCTGA
AGTCATCCTATACCACATGTCTAATGGTTTCCGAGGAGAACGAGAATGTG
ATCGAGGTGGAAGTGGAGAAACAGGGCAAATACATCGTGTGCTTCGATCC
CTTGGATGGATCCTCCAACATAGACTGCCTGGTGTCGATCGGTTCAATCT
TCGCCATTTACCGCAAGAAAAGCGATGGTCCGCCCACAGTGGAGGATGCA
CTGCAGCCCGGAAATCAGCTGGTGGCCGCCGGCTACGCGCTATACGGTTC
GGCCACAGCAATTGTCCTGGGTCTGGGTTCGGGAGTGAATGGCTTCACTT
ATGACCCGGCCATCGGAGAGTTCGTGCTGACCGATCCCAACATGCGGGTG
CCGGAGAAGGGAAAGATATACTCTATCAACGAGGGATATGCAGCGGATTG
GGAGGATGGTGTCTTCAACTACATTGCGGCCAAGAAGGATCCCGCCAAGG
GAAAGCCCTATGGAGCGCGGTACGTGGGTTCCATGGTCGCGGATGTGCAT
CGCACCATTAAATACGGCGGCATCTTTATCTATCCGGCAACAAGTCCGCT
CCCAGCGGAAACTTCGTCTGCTGTACGAGTGCGTGCCCATGGCCTATCTG
ATGATCCAGGCTGGAGTCTGGCCAGCGACGGAAAGATCAGCATTTTGGAC
ATTGTGCCCAGAGATCCACGAGCGCAGTCCCATATTCCTAGGATCCAGTC
GACGTGAGAGCACTTTGCTACTTAAGGGCAGCTTTCTAGAACAT
FMO10062.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:13:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fbp-RE | 1202 | CG31692-RE | 118..1144 | 9..1025 | 4870 | 98.9 | Plus |
| fbp-RA | 1130 | CG31692-RA | 66..1072 | 29..1025 | 4770 | 98.9 | Plus |
| fbp-RD | 1185 | CG31692-RD | 140..1127 | 48..1025 | 4675 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:13:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19761678..19762308 | 997..372 | 2925 | 99 | Minus |
| 2L | 23513712 | 2L | 19762487..19762831 | 375..31 | 1725 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:13:29 has no hits.
FMO10062.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:51 Download gff for
FMO10062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbp-RB | 111..1132 | 1..1015 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:56:25 Download gff for
FMO10062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbp-RE | 113..1134 | 1..1015 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:30 Download gff for
FMO10062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbp-RE | 113..1134 | 1..1015 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:30 Download gff for
FMO10062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19761655..19762305 | 375..1015 | 98 | <- | Minus |
| 2L | 19762488..19762831 | 31..374 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:56:25 Download gff for
FMO10062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19761655..19762305 | 375..1015 | 98 | <- | Minus |
| arm_2L | 19762488..19762831 | 31..374 | 100 | <- | Minus |
