FMO10070.5prime Sequence
722 bp (722 high quality bases) assembled on 2010-10-30
> FMO10070.5prime
CAGTCGACATGTTTCCTAGTCGCCAAAACCAAACTTCCTTGAAGAACTTC
GGTGACAAGACCGCCAACCTCTTCAGCAAGAAGAAGGATGAGGCCGAGAA
GCTGGCCAACGAGAAGGCTGCCGAGGCCCAGAAGCTAGCCGAGGAGCAGG
CCAAGAAGGTGGGCCAGTCCGTACAGCAGACCAAGGGCGAGGCCGAGCAG
TTGGCCGCCAGCACGGCCAAGGAAGCCGCTGCTCTAGCCACCGCGGAGGC
TCAGAAGGCTGGACAGGCGATTGACCAGGGTGTGAACCGTGCCGCCGGAG
CCGTCAACCAAGGCAAGCAGGCGGTGGACAACACGGTGGCCCAGGCGGCG
GCCGTGGCCCAGAACTCCAAGCAGGTGGCGGCCAATGTGGCGGAGGCCTC
CCAGCGAGCGGCCGCCAATGCGGTGGACCAGACCAAGAAGGCGGCCAACG
ACGCCATCAACAAGAGCGTGAAGGCCGCCGAGAACGTGGCGGACCAGAAG
CTGAAGCAGGCGGAGGGCGCCATCGATGGGGCACTGAAGCAGACCAGTCA
AACGGTGGACCAGAAGCTGCAGGAGGCCAACCAGTATGTCGACCAGAAGC
GCCAGTCCGTCGAGAAGACCGTCCAGGATGCGGCAGGACAGGCCCAGGAG
TCTGCCGGACAGCAGGCCAACGCCCTGTTGGGCAAGCTGCATCTGGGTCA
GAAGGCAAGCTTTCTAGACCAT
FMO10070.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:13:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1648-RB | 884 | CG1648-RB | 19..722 | 1..704 | 3460 | 99.4 | Plus |
| CG1648-RC | 1392 | CG1648-RC | 215..885 | 34..704 | 3325 | 99.7 | Plus |
| CG1648-RA | 1047 | CG1648-RA | 215..885 | 34..704 | 3325 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:13:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9811481..9811969 | 704..216 | 2415 | 99.6 | Minus |
| 2R | 25286936 | 2R | 9812482..9812664 | 216..34 | 915 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 15:13:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 2933..2997 | 477..541 | 109 | 63.1 | Plus |
FMO10070.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:52 Download gff for
FMO10070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1648-RB | 19..722 | 1..704 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:56:28 Download gff for
FMO10070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1648-RB | 19..722 | 1..704 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:33 Download gff for
FMO10070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1648-RB | 19..722 | 1..704 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:33 Download gff for
FMO10070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9812482..9812664 | 34..216 | 100 | <- | Minus |
| 2R | 9812724..9812756 | 1..33 | 94 | | Minus |
| 2R | 9811481..9811968 | 217..704 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:56:28 Download gff for
FMO10070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5698986..5699473 | 217..704 | 99 | <- | Minus |
| arm_2R | 5699987..5700169 | 34..216 | 100 | <- | Minus |
| arm_2R | 5700229..5700261 | 1..33 | 94 | | Minus |
