FMO10072.5prime Sequence
1046 bp (985 high quality bases) assembled on 2010-10-30
> FMO10072.5prime
CAGTCGACATGCTCAAGAACTGGACAATAAATACGTTCCTTTTGGTTTCG
TTTCTTTGTAGTGCGACTGGGCAAAATGAAGGAGGAGCACCTGGAATATT
CAACGGAATGTCATTCACGGAAAATCTTCAACCAGACCCAAATCAAGTTT
GCGGCATGAGCAATCCAAATGGCTTGGTGGCCAATGTGAAGGTGCCCAAA
GATTACTCCACACCTGGCCAATTTCCATGGGTGGTTGCCCTTTTCAGTCA
GGGAAAATACTTTGGGGCCGGTTCTTTGATTGCCCCAGAAGTAGTCCTTA
CAGCGGCTAGCATTGTGGTGGGCAAGACTGATGCGGAAATTGTGGTGAGA
GCAGGCGAATGGAATACGGGACAACGCAGTGAATTCCTACCGTCGGAGGA
TCGTCCGGTGGCCAGAGTTGTGCAACACAGGGAGTTTTCGTATTTATTGG
GAGCCAATAACATTGCCCTTCTGTTCCTAGCCAACCCATTTGAGTTGAAA
AGCCACATCCGAACCATCTGCTTGCCCAGCCAGGGAAGGTCCTTCGATCA
GAAGCGCTGCTTGGTGACCGGATGGGGAAAGGTGGCATTCAACGATGAAA
ATTACTCAAATATCCAAAAGAAAATCGAACTGCCGATGATTAACAGGGCG
CAGTGCCAGGATCAGTTGAGAAACACCAGATTGGGCGTCTCGTTTGATCT
GCCTGCTAGTCTGATATGCGCCGGCGGCGAGAAGGATGCGGGAGACTGCC
TCGGCGACGGAGGATCCGCTCTATTCTGCCCCATGGAGGCGGACCCATCG
CGCTATGAGCATCTGGCATCGTTAACTGGGGCATCGGCTGTCAAGAGGAA
AACGTTCCAGCAGTCTACACAAATGTTGAAATGTTTCGGGATTGGATCTA
TGAGCACATGGCCCAGAACTCCACAGTGTTCATTCGCTGCTGGTCAGTTA
CATCGAACTATAAACAGGAAGCCAGCTTTCTAGAACCATTCGTTTGGCGC
CCCGGGCCCAGGTTAGTGGTCCAAATTATAATCCAAATCCTATTCA
FMO10072.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:13:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14990-RA | 1072 | CG14990-RA | 32..998 | 8..970 | 4720 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:13:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4093383..4094270 | 87..970 | 4225 | 99.4 | Plus |
| 3L | 28110227 | 3L | 4093238..4093317 | 8..87 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:13:46 has no hits.
FMO10072.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:53 Download gff for
FMO10072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14990-RA | 28..1009 | 1..982 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:56:31 Download gff for
FMO10072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14990-RA | 27..1008 | 1..982 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:35 Download gff for
FMO10072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14990-RA | 27..1008 | 1..982 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:35 Download gff for
FMO10072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4093233..4093316 | 1..86 | 95 | -> | Plus |
| 3L | 4093383..4094282 | 87..980 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:56:31 Download gff for
FMO10072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4093233..4093316 | 1..86 | 95 | -> | Plus |
| arm_3L | 4093383..4094282 | 87..980 | 98 | -> | Plus |
