FMO10075.5prime Sequence
1145 bp (1048 high quality bases) assembled on 2010-10-30
> FMO10075.5prime
CAGTCGACATGCTCGTAAAAACGCTTGGCGCGCATTTTGCAGCCGGGCAA
AATGCAAAAAAATGCAGCTGCTGCGCTCTGCTGATTTCCCTGCTCTGCGT
ATTACTTCTTAGTCTAAACCCTTTACCAGTAACCAGTCATGTCACTAGCG
CCGGATCATCAACAGCCCTATCTTCCGATCCCAACCTAGTGCTGGTCAAC
AAATGTTGCGAGAAGTTCGAGATACACGTGGACCATGAGTGTCAGCAGGT
CAATGAAACGGACTACTTCCAGCCGATGTTCACCAGCTATGGAGGAGAGC
AAAACAGGCCCGTTAAGTTCAAATTCGTCATCGGGATTCCAAATTGTGGA
TCCATGCAGATGTGGCCAATATACCACTATGCTGGCAGCTCTGATAAGCT
AGTGTTACTGGATGATGGGAGGCTAAGGCATTACACCAATGCCGAAAACG
AAGCAGAGGAGCGTCATGGAATACAATCGGATTATGAGGAGGATATTGCC
GGCAGTCTGGAACCGCTATACCATGACTACGATAAGGGATTGTATTGCAT
TGACAAGGCCACTTCCAGTACTGGAGAGGAAAATGTGCTATTCGCCAACA
TTTGCTTGGCCCGCAAGGAGATCAAGTGGAGTGACTCAAACTTTCTGCTC
CGCAAAATCTTAAACCCAATTTTCCATGGCATCTCGCTTGTTATCCTGCT
GGTCATCGCCATCATCTATTTTATACTTCCTACTCTCAGAGATCTGGTTG
GTAACATTGTGACAACGATAGCCATGTGCCTTATGGTAAGCCAGGCAGCA
GACCTTGTCAGAATTTTCACCGAGCTGACCAGCCATGTGAGCTTCATTGT
GGCGGACATTATCCTGTGCTTCAGCCTCTTGGCAGCTTTCTTCTGGCTGA
CAGTTTCGGTTTTACATTTGGAGACCTTTCGTTCGAGGAACGTCTTCCTG
CGAGTCACGGACGGCAAGAAGTACTGCTATTATTCTGCGTATGCTTGGGA
TGCACAGCACGATGGCTGCACTGGCTGTTTTTCGCACATTTCTTCTCGAC
GCGGATCTACAAACAGGAGCACATGGTGGGCCGAGACAAGAGACGAATCG
GCTGGCTAGGCCATATGCCTATTCCTTGCTCATGCCTTGTACATT
FMO10075.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:10:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mthl5-RA | 1949 | CG6965-RA | 334..1459 | 9..1131 | 5255 | 98.4 | Plus |
mthl5-RB | 1952 | CG6965-RB | 334..1462 | 9..1131 | 5215 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:10:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11884489..11884886 | 1131..737 | 1310 | 95.3 | Minus |
3R | 32079331 | 3R | 11886583..11886835 | 261..9 | 1265 | 100 | Minus |
3R | 32079331 | 3R | 11884942..11885125 | 739..556 | 920 | 100 | Minus |
3R | 32079331 | 3R | 11885180..11885351 | 558..387 | 860 | 100 | Minus |
3R | 32079331 | 3R | 11885415..11885540 | 386..261 | 630 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:10:06 has no hits.
FMO10075.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:19 Download gff for
FMO10075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mthl5-RA | 331..1456 | 9..1131 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:54:48 Download gff for
FMO10075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mthl5-RA | 334..1459 | 9..1131 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:56 Download gff for
FMO10075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mthl5-RA | 334..1459 | 9..1131 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:56 Download gff for
FMO10075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11884472..11884883 | 740..1145 | 94 | <- | Minus |
3R | 11884942..11885123 | 558..739 | 100 | <- | Minus |
3R | 11885181..11885351 | 387..557 | 100 | <- | Minus |
3R | 11885415..11885539 | 262..386 | 100 | <- | Minus |
3R | 11886583..11886835 | 9..261 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:54:48 Download gff for
FMO10075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7710194..7710605 | 740..1145 | 94 | <- | Minus |
arm_3R | 7710664..7710845 | 558..739 | 100 | <- | Minus |
arm_3R | 7710903..7711073 | 387..557 | 100 | <- | Minus |
arm_3R | 7711137..7711261 | 262..386 | 100 | <- | Minus |
arm_3R | 7712305..7712557 | 9..261 | 100 | | Minus |