FMO10077.5prime Sequence
1145 bp (1026 high quality bases) assembled on 2010-10-30
> FMO10077.5prime
CAGTCGACATGACGCAATGGTGTGCTATCAGTGTAATGAAGGCCGTGCTC
TGCGTCGGCTGCACGGAGGTGGACTACGTGACCACCATGGATAAGGTCGA
CTTCCAGTGCGACAGGTGCAGCACCCAGAATGGAATGCTTCAGCGCAGCG
GAAGATCCTCGAATGTTAGTACGGCCCTGCGTCTGTTGGGCGCCAATGTG
GAGTTGTTCGGTGTGCTCACCCGTAATCCCACCTATCGCATGATTCTGGA
TGATCTCGAGCAGCGGGGCATTGATATTAGCCATTGTACATTCACGGACG
CAAGTCCTCCCTTTTCCACAATTGTCCAAGATCGCTGGACGCGTCGTTGC
ACGGTGGTGTATTGCGACAAGTCATTTCCATATGTTACGGCAGCGGATTT
CCGCAAATTGGATCTCGATCAATACGGCTGGGTGAATTTTGAGGCACGGA
GTCCACGTGAAACTTGCGATATGATACGCCTAATCCTCGATCACAACAAC
GGGCGGGATGAACGGGATCGGATAGTGGTATCGTTGCAGATTTTCAATTC
CTTCGAACAGGTCGTGCATCTGATTGCCATGTGCGACTATGTGTTCGTCA
CCAAGTATATAGCCGAGTCCAGAGGCTGGAAGTCACCGCTGGAAGCCTGC
GAGGGTGTCAATGCGCTACTGCGCATGCCAAGGAACATTAGAATTCGCAG
ACCCTGCATCATTGTGCCGTGGAGCAGCCTGAGAGCAGGATGTATGACCA
CGGAAGGGGAGTACTTCGAAGTGCCAGCACACAAGCCGAAAAAGATCATC
GATCGGGTGGGCGATAGTGATTGCTTCACGGCGGGCTTCATTTATGCCGC
TTTTGTGCGGCAAGGCGATTGGCCGAAGCCGTGGACTTCGCCAATGCTGT
GGCCAGCTATAAGTTGGGCTATGTGGGTTTCGATTGCCTGGGTCATTTGC
CAATCGATGCGGTTAAGCTGCCCGTTAGAATGAGGTGTGCAGTGAGGTGT
CCTTCGACGATGAAGATAACGGCGATCAGTTGAATAGCTGCAGAGCACCT
GTTACGCCGATTGATTCTGGCGGAAAGTCTCCATTGCACCCTGAAAGGAA
GTTCGATCGGACTCCACTTCAGGCAAGCTTCTAGAAATCTGGGCC
FMO10077.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:10:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12289-RA | 1395 | CG12289-RA | 179..1292 | 9..1109 | 5195 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:10:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11457239..11458292 | 1058..9 | 5045 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:10:10 has no hits.
FMO10077.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:20 Download gff for
FMO10077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12289-RA | 175..1297 | 1..1113 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:54:51 Download gff for
FMO10077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12289-RA | 175..1297 | 1..1113 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:58 Download gff for
FMO10077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12289-RA | 175..1297 | 1..1113 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:58 Download gff for
FMO10077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11457174..11458296 | 1..1113 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:54:51 Download gff for
FMO10077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11450274..11451396 | 1..1113 | 98 | | Minus |
