FMO10081.5prime Sequence
788 bp (788 high quality bases) assembled on 2010-10-30
> FMO10081.5prime
CAGTCGACATGAGTCCGGTTCAGTCATATTCACACAGTCGACTACTCCTG
CTCGTGGTCATCGTGACCTTGGGCGTGGTCCAATCCAGTCGACTGCCGGC
GGAGGTGGGCTCCCAGCCACACAGCATCTCACTGCGTCGGAATGGCGTCC
ATGTGTGCGGAGGAGCTTTGATCCGTGAAAAGTGGATCCTCACCGCAGCC
CATTGCGTCAGTTTGGGCGGTGGACAGCAGAGCTACCCAGCTAAATCCTA
CAATGTGCGAGTGGGCAGCATTCAGCGACTGACCGGTGGTCAACTGGTGC
CTCTGTCCAAGATCATAATCCACACGAACTACTCCAGTTCGGATGCAGTT
GGCTCTAATGACTTGGCCTTGCTGGAGCTGGAAACGTCGGTGGTCCTGAA
TGCGAATACGAATCCGATTGATTTGGCCACCGAGCGACCGGCGGCGGGCT
CCCAGATTATCTTCTCCGGCTGGGGATCCAGCCAGGTGGACGGATCTCTC
AGTCATGTCCTCCAGGTGGCCACCAGACAGAGCCTGAGTGCGTCCGATTG
CCAAACGGAGCTGTACCTGCAGCAGGAGGATCTGCTCTGTTTGTCCCCGG
TGGACGAGGACTTCGCCGGACTCTGTTCCGGTGATGCCGGAGCTCCGGCG
TCTTACAACAACCAATTGGTGGGCATTGCCGCCTTCTTTGTGAGCGGATG
TGGTTCCGAGCAGCCCGATGGCTACGTGGATGTGACCCAGCATCTGGAGT
GGATTAACGAAAACGCTGTTGCAAGCTTTCTAGACCAT
FMO10081.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:10:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4653-RA | 895 | CG4653-RA | 7..769 | 8..770 | 3815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:10:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16704613..16705152 | 231..770 | 2700 | 100 | Plus |
| X | 23542271 | X | 16704087..16704311 | 8..232 | 1125 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:10:22 has no hits.
FMO10081.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:21 Download gff for
FMO10081.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4653-RA | 1..765 | 9..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:54:58 Download gff for
FMO10081.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4653-RA | 2..772 | 5..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:51:01 Download gff for
FMO10081.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4653-RA | 2..772 | 5..774 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:51:01 Download gff for
FMO10081.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16704080..16704311 | 1..232 | 98 | -> | Plus |
| X | 16704615..16705155 | 233..774 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:54:58 Download gff for
FMO10081.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16598113..16598344 | 1..232 | 98 | -> | Plus |
| arm_X | 16598648..16599188 | 233..774 | 99 | | Plus |
