FMO10084.5prime Sequence
1120 bp (1019 high quality bases) assembled on 2010-10-30
> FMO10084.5prime
CAGTCGACATGCTTTTGGCCCGTTTAAACCATGTGCTGTCAGGACGACCG
ATGCGCCTTTTGGGCCAGTCTGGATGTCCTCGCCTGTGGAGCTCAGCCCA
TGCGCAGATGAACAGTAATTCCTTAAGAACACCTTCCTTGGCTCAAGGAA
AGTCAGTGATTCCTAAAAGGAATATGCAAGAACTTGGGATGAGAAAGTAT
TCCAGGGAGTCGAGAGATCGCGATCGTTCCCAACTGGAGAGTCGAACCAG
AGGTCCTTCCCTCAAGGAGCGCATGATGGGACCCCCCAGTGAAAATGCTT
ACTCCATGGGCAAGGGAGCGGCGGCTGGAGCGGCTCTGATGGGTCTCGTG
GGTCTGTGCTACTATGGTCTGGGCCTTGCCAATCAACCGAGTATCTACGA
CCACTCGATGGTGTGGCCCCAGTACGTGAGGGATCGTATTCATGCCACCT
ATGCCTATTTCGGAGCATCCTGTGGTGTAACAGCTGCTTCAGCCGTTGCC
TTTTTCCAATCGGATGCCATGATGGCTCTGATGACGCGTTCTGGATGGGT
TGCCTCATTGGTTACCCTGGGACTGGTAATGCTCAGTGGATCCATTGCAC
AAGGCCTAGAATATCAGCCGGGATTCGGAGCCAAGCAGCTGGCCTGGCTC
GTCCACTGTGCCGTTCTGGGAGCTGTCCTGGCACCCATGTGCCTCCTGGG
TGGACCCATTTTGACCAAGGCCCTTTTGTACACCAGCGGAATCGTGGGTG
CCCTGTCCACCGTGGCCGCTTGTGCCCCGAGCGAAAAGTTCCTGCATATG
GGCGGACCGCTGGCCATTGGATTGGGCGTGGTCTTCGCCTCCTCGCTAGC
CTCCATGTGGTTGCCGCCCACTACTGCAGTGGGGGCGGGACTGGCCAGCA
TGTCGTTGTACGGCGGACTGATTCTGTTCAGCGGATTTCTTCTGTACGAT
ACCCAAAGGATCGTAGTCGGCGGAGTTGTATCCCAGTACAGTAAATCCCT
ACGATCCAATTATCATGCCCTGCCATTACATGATGCGCTCACATCTTTAA
CCGCCATCGCCAATAATTTGGCTGGGGACCCAACAGGAGACGCAGCCTTT
CTGAACATTCGTTCGGCGCG
FMO10084.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:10:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1287-RA | 1426 | CG1287-RA | 129..1214 | 4..1080 | 5065 | 98.4 | Plus |
CG2076-RB | 1491 | CG2076-RB | 907..1307 | 615..1010 | 575 | 77.1 | Plus |
CG2076-RA | 1319 | CG2076-RA | 735..1135 | 615..1010 | 575 | 77.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:09:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7501224..7502248 | 1022..4 | 4865 | 99.2 | Minus |
X | 23542271 | X | 11091354..11091610 | 615..871 | 505 | 79.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:09:59 has no hits.
FMO10084.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:18 Download gff for
FMO10084.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1287-RA | 125..1219 | 1..1086 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:54:44 Download gff for
FMO10084.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1287-RA | 125..1219 | 1..1086 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:53 Download gff for
FMO10084.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1287-RA | 125..1219 | 1..1086 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:53 Download gff for
FMO10084.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7501158..7502248 | 1..1086 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:54:44 Download gff for
FMO10084.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3326880..3327970 | 1..1086 | 97 | | Minus |