Clone FMO10091 Report

Search the DGRC for FMO10091

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:100
Well:91
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG10597-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10091.5prime Sequence

626 bp (626 high quality bases) assembled on 2010-10-30

> FMO10091.5prime
CAGTCGACATGAAGGTCTTTGTGTGCTTGTTGGCTTCCCTGGCTCTGGCC
AACGCCGGTGGCCTCCGAGGCGGTGCAGGAGGCGGCTATCTGCCCGGCGG
AGGACGTGGTGGTGGCGGCGGAGGATTCGGTGGCCGCCCGGCTATTGGAG
CTGGCCTGGTGTCCCACGTCTCGCAGTCGCAGGGCAACACTAAGGTCCAC
ATTGGTGGTGGTTCCGCCGGCGGTGCTGGTGCTTATGGCGGCGGTGCTGC
CTCGTACGGCGGTGGAGCTGGTGCTGCCTATGGAGGTGGTGCTGGAGCTT
CCTACGGCGGTGGTGCAGCCTCTTATGGCGGTGGACGCGGATCTGGTGGA
TGGCAAGGAGCTGGAGCTGGAGCTGGTCGTGGTGGTGCTGGAGGAGCTGG
TGGCTGGCAAGGTGCTGGAGCAGGTCGTGGTGGAGCAGGAGGCTGGCAGG
GTGGTGCCGGAGGTGCTGGAGCTGGCAACGCCTGGGGTAACCCCGCTGAG
TTCGATTACACTGTCAACCACGCTTCCGGAGGTGCTGGTGGTGCAGGTGG
GGCCTACGGTGGTGCTGCTGGTGGTGGCTCCCGCGGCGGTGCCGGCTGGT
GGAACGATGCAAGCTTTCTAGACCAT

FMO10091.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:14:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG10597-RB 708 CG10597-RB 47..646 9..608 3000 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:14:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17230337..17230933 608..12 2985 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:14:03 has no hits.

FMO10091.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:04:56 Download gff for FMO10091.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10597-RB 1..603 9..612 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:56:39 Download gff for FMO10091.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10597-RB 43..650 1..613 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:42 Download gff for FMO10091.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10597-RB 43..650 1..613 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:42 Download gff for FMO10091.5prime
Subject Subject Range Query Range Percent Splice Strand
X 17230333..17230939 4..613 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:56:39 Download gff for FMO10091.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17124366..17124972 4..613 99   Minus