FMO10107.5prime Sequence
1133 bp (723 high quality bases) assembled on 2010-11-05
> FMO10107.5prime
CAGTCGACATGGGTGACAAAGACAAACTGATTTCTGATGAGCCAATCGAA
GATGCCGTTAGATCGGCATCCTCTAAAAAAATCAAAAACCAGGAACAATA
CTTACGAGGACCCTGGTATTTGGCCACTGGTTTTCTACTGTTTTGGGCAC
TCCTCTTCTCGGCCGTGGTATTACCACTCTTTTACCGCATTCCCACAGGA
TTGACCATTGAGGATGCATCCAAGGGCGTCTTTATCGCCGAACGAGCCCA
AATCAATCTTTACTAATTAGCCGAAATCGGTACCAAAGTCGTTGGCAGTG
ATAACAATGAGAACAAAACTGTTGACTATCTGATGGGTCTAGTGAACGAG
ATACAGGAGAATTGCCTGGATGACTACTTCGACATCGAAGTCGATTTGCA
AGAGGTCTCGGGATCCTATATTCATTGGACCATGGTCAATATGTACCATG
GCGTTCAGAATATTGTGATCAAACTGAGTCCCAAGAATACCACGAGTACC
ACTTACCTGCTCGTCAACAGTCACTTCGATTCCAAGCCGACTAGTCCATC
TGCTGGCGATGCTGGTCAGATGGTTGTTGCCATCCTGGAGGTCCTGCGAG
TGATGTGCTCAACCAAGCAAGCCATTAGGCATCCAGTCGTCTTTCTACTG
AACGGAGCCGAGGAGAATCCACTACAAGCTTCGCATGGCTTCATTACCCA
ACACAAATGGGCTTAAAAACTGCAAGGTGGTTCTCAATTTGGATGCAGCT
GGCAATGGCGGGAAGTGATATAGTGTTCCAAACTGGACCTATAGCCCTTG
GCTTGTAGAATAATACAAAGAAGATGCACCACACTATCTGGCTACCAAAT
GGCTGAAGAAATCTTCCAAACAGCATCCTGCCCTCCGACACTGATTTTGC
TATCTTTGTCAGTATGGTAATCTTATGGTTTGACAGGCCAGTTAATCAAT
GGTTCTCCTATCACACCAAGTACGACCATTCCCAATATTCCAGAGGATCC
ATACAAATACGGGGCGAATTATTTGCTTGGTCTGGTGCGAATCCTAGCCC
ATTCCTACGGGAACTGGATAACCAGAGGCTTATGCCACCAGGGAATGCCC
ATCCTTTTCGCAAGTGTCCTTGGGACGTGTACT
FMO10107.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:51:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10073-RA | 2751 | CG10073-RA | 57..1164 | 9..1110 | 4760 | 96.5 | Plus |
CG10073-RC | 2747 | CG10073-RC | 73..1160 | 29..1110 | 4660 | 96.4 | Plus |
CG10081-RB | 2732 | CG10081-RB | 470..794 | 433..758 | 300 | 73.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:51:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19381755..19382451 | 29..726 | 3395 | 99.4 | Plus |
2R | 25286936 | 2R | 19382655..19382772 | 812..926 | 410 | 95.8 | Plus |
2R | 25286936 | 2R | 19382511..19382595 | 726..810 | 315 | 96.5 | Plus |
2R | 25286936 | 2R | 19359536..19359653 | 416..533 | 230 | 79.7 | Plus |
2R | 25286936 | 2R | 19377602..19377675 | 639..712 | 205 | 85.1 | Plus |
2R | 25286936 | 2R | 12360234..12360317 | 629..712 | 195 | 82.1 | Plus |
2R | 25286936 | 2R | 12356445..12356532 | 625..712 | 185 | 80.7 | Plus |
Blast to na_te.dros performed 2014-11-26 16:51:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 2935..2998 | 324..388 | 115 | 66.2 | Plus |
FMO10107.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:38 Download gff for
FMO10107.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10073-RA | 61..1168 | 9..1110 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:08:29 Download gff for
FMO10107.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10073-RA | 57..1164 | 9..1110 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:38:56 Download gff for
FMO10107.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10073-RA | 57..1164 | 9..1110 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:38:56 Download gff for
FMO10107.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19381676..19381696 | 9..29 | 100 | -> | Plus |
2R | 19381756..19382450 | 30..725 | 99 | -> | Plus |
2R | 19382511..19382595 | 726..810 | 96 | -> | Plus |
2R | 19382654..19382774 | 811..927 | 94 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:08:29 Download gff for
FMO10107.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15269181..15269201 | 9..29 | 100 | -> | Plus |
arm_2R | 15269261..15269955 | 30..725 | 99 | -> | Plus |
arm_2R | 15270016..15270100 | 726..810 | 96 | -> | Plus |
arm_2R | 15270159..15270279 | 811..927 | 94 | -> | Plus |