FMO10111.5prime Sequence
1154 bp (1034 high quality bases) assembled on 2010-11-05
> FMO10111.5prime
CAGTCGACATGGAACAGTCGCAGAACTTACTCGCCAAACAGTCCAAAAAT
GTGGAGTTCCAAGATGTGTACTACACCGTCAAGGAGCGCAAGAATTTCTG
GCGCGTAACCGGTGAGCGTCGAATTCTGAATGGAGTCAGCGGCAGTTTCC
GGAATGGTCAACTTTCGGCAATCATGGGACCCTCAGGAGCCGGAAAAAGC
AGTTTGCTTAATGCGATTTCGGGTTTCAGACGCGACGGAGTCACTGGGAA
CATCAAGATGAAGCGGGACAATGCCTGCTATATCACTCAGGACGACCACC
ACCAGACCCTGCTGACTGTCGAGGAGCTTATGAATCTCGCCTGCGATCTC
AAGTTAAAGAATCGTCACAAAAAGGCTGAAATCATGACCGATATATTGGA
GAATCTGCACTTGAATCACCGGCGCAATGTGACGGCAGAGAAGTTGAGTG
GCGGGGAGCGTAAGCGATTGTCCATCGCCCTGGAGCTGGTGGACAATCCA
AACATATTCTTCTTGGACGAACCAACCAGTGGCCTGGACGAAGTGACAGC
GGCCCAGTGCATCCGTTTGCTGCAGGCGATGGCATACGAGGGTCGCACCA
TCGTTTGCACCATCCATCAACCTTCGGCCACGATATACAACTACTTCGAT
AGCATCTACGTCCTGGCCAAGGGCCAATGTGTCTACCAAGGCAGTCCCAG
AGCCACCATTCCCTTTCTGCGATTGGCCCAGCTGGATTGCCCCAGGCATT
ACAGTCCTTCGGATTATATTATTGAGCTGGTGGATGCCGAGGATGGACAC
CTGGTGCCAGCACTCAGCGACCTAACCGAAAACGGGAAGCTGATCTATGT
GGTCAGTCAGTCTGAGCAATTGGCACCTCAGCAGGCGGTCACCACAATGT
TTCTGGAGCAACAGAAGCGTCCATTCTTGCCCGCCTTTTTCGCTGGCAGC
GCCGCCTCCACGGATGGAACGCTAATTGAGGCACCAGTGCTCTGTTGGAG
CAAGTGAATGCCTTCTCGAAGAGACTTCCATTACGATCCGCGGGATGTAT
GTGGGTTTCGGTCAGGTTTATCGTTCTTATGCCGATATGTCTACTGAAAA
TACGCCGTGCCTCGTTTGCAACTTGACATCAATGTTCCATCACCCTGCTT
GGGT
FMO10111.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32091-RB | 2967 | CG32091-RB | 680..1821 | 2..1144 | 5255 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11640651..11641195 | 224..768 | 2725 | 100 | Plus |
| 3L | 28110227 | 3L | 11641261..11641592 | 769..1102 | 1310 | 95.5 | Plus |
| 3L | 28110227 | 3L | 11640068..11640197 | 100..229 | 650 | 100 | Plus |
| 3L | 28110227 | 3L | 11635094..11635192 | 2..100 | 480 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:55:28 has no hits.
FMO10111.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:13:18 Download gff for
FMO10111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32091-RB | 676..1829 | 1..1154 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:10:42 Download gff for
FMO10111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32091-RB | 679..1832 | 1..1154 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:41:01 Download gff for
FMO10111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32091-RB | 679..1832 | 1..1154 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:41:01 Download gff for
FMO10111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11635093..11635191 | 1..99 | 97 | -> | Plus |
| 3L | 11640068..11640197 | 100..229 | 100 | -> | Plus |
| 3L | 11640657..11641195 | 230..768 | 100 | -> | Plus |
| 3L | 11641261..11641587 | 769..1096 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:10:42 Download gff for
FMO10111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11628193..11628291 | 1..99 | 97 | -> | Plus |
| arm_3L | 11633168..11633297 | 100..229 | 100 | -> | Plus |
| arm_3L | 11633757..11634295 | 230..768 | 100 | -> | Plus |
| arm_3L | 11634361..11634687 | 769..1096 | 96 | -> | Plus |
