FMO10112.5prime Sequence
1143 bp (1011 high quality bases) assembled on 2010-11-05
> FMO10112.5prime
CAGTCGACATGCGATTACGCCGCCGTTGGCCGCGAAGGATGCGGCGTGCC
ATGGAACAACTGCGTCTCCAGTCCCGCCGGAAGCTGCTGGCGCTCACGAT
GACTGGAGGACTCTGCCTGGCTATCTGGGTAGTTGCCAACTATCTGTCCG
CATCGGAGGAGGGCCAAACCGGCGGCTTCAGCAGCGCCTGCACTGCCATC
GATGCGGTTTACACGTGGGTCAATGGCTCGGATCCCAACTTTATTGAGGA
CATCCGGCGATTCGATGACAAGTACGATCCCTCGCGGTTCGATGACAAGA
ATGAGCTGCGGTACTCTCTGAGGTCCCTGGAAAAACACGCCGCATGGATC
AGGCATGTGTACATAGTAACCAATGGCCAGATTCCAAGTTGGCTGGATCT
CAGCTACGAAAGGGTCACGGTGGTGCCCCACGAAGTCCTGGCTCCCGATC
CCGACCAGCTGCCCACCTTCTCCAGCTCGGCCATCGAGACATTTCTGCAC
CGCATACCAAAGCTGTCCAAGAGGTTCCTCTACCTCAACGACGACATATT
CCTGGGAGCTCCGCTGTATCCGGAGGACTTGTACACTGAAGCGGAGGGAG
TTCGCGTGTACCAGGCATGGATGGTGCCCGGCTGCGCCTTGGATTGCCCC
TGGACGTACATAGGTGATGGAGCTTGCGATCGGCACTGCAACATTGATGC
GTGCCAATTTGATGGAGGCGACTGCAGTGAAACTGGGCCAGCGAGCGATG
CCCACGTCATTCCACCAAGCAAAGAAGTGCTCGAGGTGCAGCCTGCCGCT
GTTCCACAATCAAGAGTCCACCGATTTCCTCAGATGGGTCTCCAAAAGCT
GTTCAGGCGCAGCTCTGCCAATTTTAAAGGATGTTATGCGGCACCGCAAT
GTGTCCACACTCAGGAACTACGTCGCATTGTGAAGCGTTTTACAAGGGCA
AACTCATGTCCTCTGAACCTCCGAACTGGTGACCTCCAGCCTCCGAGCCA
CAGAACAACTCCAGCGCCACGGGCCTGCGCAAGGAGGATTTAAAGTCTTC
CCACCGAAATTTACCTCCTCACCTCGCTGAATGCCACATATGTTGCTGAA
TAAGGCCTTATTGCCTTTAAGGCACGCCCAGGTCTCTTGCGCA
FMO10112.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8027-RA | 2597 | CG8027-RA | 101..1211 | 9..1128 | 5055 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9205926..9206872 | 1051..100 | 4245 | 98.5 | Minus |
| 2R | 25286936 | 2R | 9206934..9207024 | 99..9 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:55:31 has no hits.
FMO10112.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:13:18 Download gff for
FMO10112.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8027-RA | 92..1220 | 1..1142 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:10:44 Download gff for
FMO10112.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8027-RA | 95..1223 | 1..1142 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:41:03 Download gff for
FMO10112.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8027-RA | 95..1223 | 1..1142 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:41:03 Download gff for
FMO10112.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9205841..9206872 | 100..1142 | 97 | <- | Minus |
| 2R | 9206934..9207030 | 1..99 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:10:44 Download gff for
FMO10112.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5093346..5094377 | 100..1142 | 97 | <- | Minus |
| arm_2R | 5094439..5094535 | 1..99 | 95 | | Minus |
