FMO10117.5prime Sequence
1171 bp (1043 high quality bases) assembled on 2010-11-05
> FMO10117.5prime
CAGTCGACATGGAGGATCAGGGCGACGTGACAGACCAAGCCGCTGGTAAG
CTGAGTAGTTCGAATGCCCAGTGCTCCAGAAACCGATGTGCTAATGATGA
CCCCATTATGGGCAGCCACAGTCAGAGTCGCCAGAACTCGTCCGGCATGC
TGAACATGATGGACGCCAGCTCCTTCAGCATGCCCCCCCCCAATCTGCAC
TCCTCAAAGGTGATCAACCCGAACAAGGCGATATTCACAATCGACGCGAA
CACAGGGCAAATTTTTATAGTGAACAACAAGGCCTGCCAGCTGCTGGGCT
ACACGTCGCAGGAGTTGAGGAACAAGGGATTCTTCGACCTGCTTAACGGC
AAGACAGAGAGCCACATCTCCTCCCTGGCGGAGATGCAGATCGAAGGCGA
TGAGGGCCGGGTCGTCCTGCTAAGTGGAAAGGTCATCGAGATGAAGACCA
AGTCGGGCGGCAAGATCCTGGTCTCTCTCTGGATCCGGCAGATCAGCAGC
GATGGCCGACACATAGCCGTCGCGGAGCCTGTGGAGAGGCATATTTGCCA
CATCAGCACCGATAGATCCGGAGTGATAACATCCGTTGACTCCACCACGG
CCACCATATTCTTTTATGAATCCGTCGAAAGCGTGGTGGGTGTCAGCATT
GTCACCCTTATCCCGTTTATAAAGCTGCCCGATCCGGATAGCCGTGAGAT
CCCCAAGAGCCTGCGGAAGCAGAGAGCTACTGGTCGAACTACGGATAACG
TAAAGTTTCCCCTGTGCTTGCTAATAGCCCTGGACGAGGATGCTTCTGCG
GGGGTATTCCCATTCGGGAAAAACCGGTCTAAATATCACCGTCTGGGTGT
TCCAGAATCTTAGTGGCCTGATTGTGGTAGATGACATAGGCAACATACTG
ATGTGCAACCAGCCTTTCTCGCTGCTAATGTTCGGATATGGTCAGGACAG
ATATGAACATGCATTTATCGGCGATCTACCCAATTTCGGCAAGGACTCTC
GCGAGGAGAGAGTCCGAATGTTTCGAACACCTCCGAATACCAGTTACGAC
TGGGAGCGGAACCGGATCCCCCTCGTCGTTGACAACGACTCCTCGCTGCC
ATCTGGCAAGAAGGTCTCGACTTAACGGACGGTCCTCTAACATCGATCGG
CTTCGGTGGGCGATGCCCACC
FMO10117.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:51:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pask-RA | 3184 | CG3105-RA | 94..1258 | 9..1171 | 5280 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:51:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23988986..23990063 | 96..1171 | 4620 | 96.5 | Plus |
2R | 25286936 | 2R | 23988831..23988918 | 9..96 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:51:56 has no hits.
FMO10117.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:42 Download gff for
FMO10117.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3105-RA | 115..1207 | 9..1099 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:08:43 Download gff for
FMO10117.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pask-RA | 94..1186 | 9..1099 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:39:08 Download gff for
FMO10117.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pask-RA | 94..1186 | 9..1099 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:39:08 Download gff for
FMO10117.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23988831..23988918 | 9..96 | 100 | -> | Plus |
2R | 23988987..23989991 | 97..1099 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:08:43 Download gff for
FMO10117.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19876354..19876441 | 9..96 | 100 | -> | Plus |
arm_2R | 19876510..19877514 | 97..1099 | 98 | == | Plus |