FMO10120.5prime Sequence
1135 bp (1028 high quality bases) assembled on 2010-11-05
> FMO10120.5prime
CAGTCGACATGGAGATGCAAAGCTACTCTGGTCGTGGACCATCGACAGGC
ACATCAGAAACAGCAACAGCAACAGCAGCAGTTGCATCTGCATCTGCATC
AGACACAGCAGCAACATTCACACTGCGACACTTCAATTGTCGGCTGGAAG
AGGCGGATTGGCCTGGGCCTCGCCAGCCGTTTATTGACTGCGAAGGCAGC
CACACCAACAGCACATCCTACACCCCCAGCAGCCTGCCCACCAGCAAAAA
CCTCATCGAGGGACCCAACAACACATTCCAGTGTGCACGGCAAGCTATCG
ACGAAGCGGAGCACAACGCATTCTATAGTTGCGATGGGGAAAGCCCATTG
TCTGAAAACTGCACTTTGAGGCTGAAGGCGCGACTGTTGCGATGGCCGTA
CGAGGCGTATGAGCACATTCGACTGGCAATCAACGGGGCACTCAGTGATT
ATGCTAGTGATAAACTTAGTGATAGTTCGAGCTGCGATGAAGGAGGCATG
GTGTTGCAATGTAAGCTGGGCCAGGCCCATGAACTATTGCTTTGTCATTT
GCAACAACTCGAGAGGGAGCCACTGCGGGAGGTGGGAAGCGCGGAGGAGA
GCTTCTCCAACGACAGCCTTCTGCAGGCCTTTCAAATCGAACTGGGCGCA
GAGCGCGATGGACTCTGGTCCTTCCTTAATCTAAGCGAGCTAATGGAGCC
CGATCACGGATTCCTGGGCATCATGAATGTCACCAACACTAGCTTAGACA
TGTTTTTGCCGAACCTTACAGCCCTGAACACGACCTCCACGGCCTCCACT
GCAGACATGGCCACCGAGTTCGCGGTAACAAAGAGCTTTCTGGACTACAG
TCCCCACGGCTACGATTTCCTATTCCTGTTCGTGGTGTTCTTTATCTTCG
CGGGTGGCCTGAGTAATATCCTTGTGTGCCTAGCCGTTGCCTTGGACCGG
AAACTGCAGAATGTGACTAACTACTTCCTGTTTTCCCTGCTATAGCCGAT
CTCCTGGTCAGTTGTTGTGATGCCCATGGGCGCGATACCAGCTTTTTTGG
GGTATGCCCACTACTTACCTGATGCACATTATGTGACCTGTGACGTACTG
CCTGCTCATCAGTATATTTGGCAATGTGTCTTACT
FMO10120.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
5-HT2A-RH | 3683 | CG1056-RH | 553..1673 | 9..1118 | 5265 | 98.6 | Plus |
5-HT2A-RF | 3541 | CG1056-RF | 414..1534 | 9..1118 | 5265 | 98.6 | Plus |
5-HT2A-RD | 3178 | CG1056-RD | 553..1673 | 9..1118 | 5265 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4622580..4623625 | 9..1051 | 5085 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:52:02 has no hits.
FMO10120.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:43 Download gff for
FMO10120.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
5-HT2-RC | 541..1680 | 1..1132 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:08:48 Download gff for
FMO10120.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
5-HT2-RF | 407..1546 | 1..1132 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:39:12 Download gff for
FMO10120.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
5-HT2A-RD | 546..1685 | 1..1132 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:39:12 Download gff for
FMO10120.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4622573..4623624 | 1..1050 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:08:48 Download gff for
FMO10120.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 448295..449346 | 1..1050 | 99 | -> | Plus |