Clone FMO10124 Report

Search the DGRC for FMO10124

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:101
Well:24
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG3841-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10124.5prime Sequence

1152 bp (1054 high quality bases) assembled on 2010-11-05

> FMO10124.5prime
CAGTCGACATGCCTCGATTTTTCCAGTTGACGTGGGCTCTTCTTTTGATT
TTAATAGGTTTCACCACTGCTGTTACTTTTATCGGAGATGATCCTGTGGT
GGAGCTCTCCTTGGGCAGAATCCAAGGAGATACTATGCAGAGCTTTGGGA
ACAAGACAATCTACGCATTCAGAGGAATACGATACGCGCAATCTCCAGTG
GGACAGCTCCGGTTCGCCAATCCAGTTCCGGAAACTAGTTGGGGTGACGA
GGTGTTCAACGCAACATCGGATTCCCTCGTTTGTCCACAACCAGGAGTAG
TTTCTTTAATGAGTGAAGATTGCCTAAAGATCAACGTTTTCACGAAGAGC
TTCGAGGACAAATTCCCAGTGATGGTGTATATTCATGGCGGAGCCAATGT
CCTGGGAAGTGGACACAGCAGCTATGAAGCAGGACCTCAATATTTGCTAG
ATCAGGACGTAGTTTTTGTGGCTTTTAACTATCGCCTTGGAGCTCTGGGC
TTTCTAAGCACAAATAGCAGTGAGACAAAGGGAAACTTTGGTTTCCTCGA
TCAGGTGATGGCTCTGGAATGGGTAAGGGATCACATATCACACTTTGGTG
GTGATCCAGAGTTGGTGACTATTATCGGAATAAGTGCTGGCTCGATGGCA
GTCAGTCTACACTTGGCCTCGCCCCTTTCCGCAGGTCTCTTCCATCGGGC
AATCCTCATGAGTGGATCGGCCACCAATCACTTTGATATAGATAACCTTT
TTTGGACACGAAAACTGGCTCGTGAGCTGGGTTGTCCAATGTATGATCCC
ACGGATGTGGTGGAGTGTCTCCGAAACGAAACGTGGACACGCATTGTGGA
AGTTTGCAAGGCATGGGAAACGTATCAGCTTGTTAATATGAAGTGGAACT
ACGAGATCGATGGACCCTTTCTACACAACCATCCTACGGAGCTAATCAAG
AGGGAAATTTCAACAAGTTTCCCTGCTAATCAGTTTCCACGGCAATGAAT
TCGAATACATGCAAATGTTGCCACTTGAAAACAAGCATCTTATTACACGA
TTTGCTCAACTTGTGGAATTATGCCCAGGTTGTTCTCTTATCGCCCGATG
CCAAATGGAAGAACTGAAGATTTTATCTAGGTGTAACATTACACACGGGA
AA

FMO10124.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:51:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG3841-RB 2051 CG3841-RB 121..1258 9..1133 5035 97.5 Plus
CG3841-RA 1967 CG3841-RA 37..1174 9..1133 5035 97.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:51:07
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9589666..9590668 9..1009 4810 99.1 Plus
Blast to na_te.dros performed on 2014-11-26 16:51:08 has no hits.

FMO10124.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:33 Download gff for FMO10124.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3841-RA 29..1108 1..1076 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:08:15 Download gff for FMO10124.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3841-RA 29..1108 1..1076 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:38:44 Download gff for FMO10124.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3841-RA 29..1108 1..1076 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:38:44 Download gff for FMO10124.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9589658..9590677 1..1017 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:08:15 Download gff for FMO10124.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9589658..9590677 1..1017 98 -> Plus