FMO10125.5prime Sequence
1126 bp (1022 high quality bases) assembled on 2010-11-05
> FMO10125.5prime
CAGTCGACATGAACAGCAAGCTGCAGACCATCTCCCGATACATGCTCAGG
CAGAAATGTGCCTTCAACTCGATGCGCAGCATTTCCACCTCGATGCCCAG
CTTGATCAGCCATAAGCATCATATTGGTAAGGATCCCTTGGTATATCGCA
CCATTGGCCAGCAGTTGGAGCTATCTGCTTCGAATTTTGGGGATGTGGAG
GCGATTGTCTCCTGTCACGAGGGCAAGCGGTACAGCTTCAAAAGTTTGCT
ACAGGAAGCGGATGCGCTGGCGGCGGGTTTCCGGAAATTGGGCCTGCAGC
CAGGTGATGCCGTTGGTCTGTGGGCACCTAACTACTTGCACTGGTACTTG
GGCATGATGGGAGCAGCTCGAGCGGGTCTCACCTCGGTGGGTTTGAATCC
AGCTTACCAGGGACCCGAAATAGCCTACTGTCTGAATAAGGTCAATGTGA
AGGCCATCATTGCGCCGGAGACCTTCAAGACGCAGAACTACTATGAGATT
TTGAGAGATATCTGCCCGGAAATCTCAGATGCGGATACTGGCAAGATCCG
GAGTGAGAAGTTTCCGCACCTGCGATCCGTAATCATTGATAGCAACGATA
GCCTGAAGGGTGCCCTGCGCTTCGATGACTTCCTGGACCTGGCCAGCAAA
TCGGAGCGCGAAGAGGTGGCCAAAATGCAGAAGAGCATTCTGCCCGAGTC
TGCGTGCAATATTCAGTTCACATCGGGAACCACTGGCAATCCCAAGGCTG
CCTGTCTTACCCATCACAATTTCGTCAACAATGGCATCCATGTGGGCAAT
CGCAACGAACTGGAGGGCGAGAGGATCTGTGTTCAGGTGCCCATGTTCCA
TGCCTTCGGTGTGATCATCTCCATCATGGCTGCTCTGACCAAAAGTGCCA
CCATGGTCCTACCCGCTGCTGGTTTCAGTCCCAAGGACTCGCTGCAAGCC
ATCGTCAATGAAAAGTTGTTCCGGTGATCCATGCACACCACCATTTTATG
TGGATTTGGTCACACGCAAAGAAGCTACAGGTGCCGCTTGGCCAGGATTA
GAAGCTGTCACGGAGGTGCCATTGTTTCGCCCGCAGCTGATCCAGGATGT
GAAACAGTTCTCACGTGGAGCGGTGC
FMO10125.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:51:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12512-RA | 2054 | CG12512-RA | 180..1302 | 9..1126 | 5130 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:51:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5339968..5341001 | 1107..76 | 4535 | 97.4 | Minus |
| 2L | 23513712 | 2L | 5341985..5342055 | 79..9 | 355 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:51:11 has no hits.
FMO10125.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:34 Download gff for
FMO10125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12512-RA | 295..1417 | 9..1126 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:08:17 Download gff for
FMO10125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12512-RA | 180..1302 | 9..1126 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:38:45 Download gff for
FMO10125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12512-RA | 180..1302 | 9..1126 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:38:45 Download gff for
FMO10125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5339946..5340997 | 80..1126 | 97 | <- | Minus |
| 2L | 5341985..5342055 | 9..79 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:08:17 Download gff for
FMO10125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5339946..5340997 | 80..1126 | 97 | <- | Minus |
| arm_2L | 5341985..5342055 | 9..79 | 100 | | Minus |
