FMO10126.5prime Sequence
1100 bp (996 high quality bases) assembled on 2010-11-05
> FMO10126.5prime
CAGTCGACATGAGCGAGTACACAAGCATTCTGCAGCGCGAGTTTCCCAAA
ATCGACCACGAGCTGCTCACCTATGTCGTTGGCGTGCTCACCGGAAGCGA
GGAGGACTTCGAAAGCGGCGATGACATCTTCGAAGCGGTGGGCGACATCC
TGCAGAGCGTCGACTGTGATAGGTCGGAGGAGAGTGTACGTACGCTTTGC
GAGCAGTTCCTCAACATCATGAAGAACAACGAGGTCAACGTGGAGCGAAA
GGTTCTCAACGCGCCGGTCAACATCGAGGAGATGGCCAAGAACATGGAGC
GGCTGGACAAGGATATGCAAAGCATCTGGGTGGCCAACAAAGATGGCGCC
AATAAAGTGGACTCCAAGAAACTAGGAAAGGCGGAGGCCAAGCTGCAGCA
GAAGCAGGAGAAACGGCAGGAGGTGAACAAACATGGTATGATTCCTGTTG
CGGTGAAGCTACAAACGGCCACAGCCTCACAGGTGACCAACAAGAAGAAC
ACCAAGCTGGATCAGAAAGGTCTTAACCGATCCATGGACATCAAGATCGA
AAACTTTGACCTGGCTTTTGGCGAAAAAGTTCTTCTGCAGAATGCGAATC
TGCTGCTGTCTTACGGACGCCGCTATGGTCTGGTGGGACGCAATGGCCTG
GGCAAGACTACACTGCTCCGCATGATTGCCGAGCGACAGCTACAGATCCC
TTCGCACATATCGGTGCTGCACGTGGAGCAGGAGGTGGTTGGCGATGACA
CACCAGCAGTGGAGAGTGTGCTGGAATGTGATACTGAGCGAACGAGACTT
CTGACCCGCGAGAGGAGATTCTGGCTGCCCTTAACAATGGAGTTCATGAT
GCGACGCTGTCCAATGAGCTGAGCGAGACCTACGCCTCTCTGCAGAACAT
CGAGGCGGACAAGGCTGTGGCCCCGCATCTGTGATACTTAAGGCCTTGGG
ATTCGATGCAGTATATGCAGCTGCGTCCAACTAATTCTTTCTTCAAGCGG
CTGGGCCATGGCGTCTGCTTTTGGCCAGGGCACTGTTCCAAAACCGGATC
TGTTATCTGCTCGATTGAGCGACGAACATGTTTAGAATTCAAAGCATTAT
FMO10126.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:51:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9330-RA | 2384 | CG9330-RA | 130..1220 | 9..1100 | 5015 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:51:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19587174..19587677 | 578..1082 | 1965 | 95.7 | Plus |
3L | 28110227 | 3L | 19586535..19586791 | 97..353 | 1285 | 100 | Plus |
3L | 28110227 | 3L | 19586892..19587115 | 354..577 | 1120 | 100 | Plus |
3L | 28110227 | 3L | 19586382..19586470 | 9..97 | 445 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 16:51:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
roo | 9092 | roo DM_ROO 9092bp | 1050..1101 | 383..433 | 113 | 71.2 | Plus |
FMO10126.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:34 Download gff for
FMO10126.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9330-RA | 118..1218 | 1..1100 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:08:19 Download gff for
FMO10126.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9330-RA | 120..1220 | 1..1100 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:38:47 Download gff for
FMO10126.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9330-RA | 120..1220 | 1..1100 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:38:47 Download gff for
FMO10126.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19586372..19586469 | 1..96 | 95 | -> | Plus |
3L | 19586535..19586791 | 97..353 | 100 | -> | Plus |
3L | 19586892..19587115 | 354..577 | 100 | -> | Plus |
3L | 19587174..19587695 | 578..1100 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:08:19 Download gff for
FMO10126.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19579635..19579891 | 97..353 | 100 | -> | Plus |
arm_3L | 19579992..19580215 | 354..577 | 100 | -> | Plus |
arm_3L | 19579472..19579569 | 1..96 | 95 | -> | Plus |
arm_3L | 19580274..19580795 | 578..1100 | 95 | | Plus |