FMO10128.5prime Sequence
1109 bp (1014 high quality bases) assembled on 2010-11-05
> FMO10128.5prime
CAGTCGACATGGCGATGACTCTGAACATTGGCTCGATGAAGCTGACAAAG
TGGCAGCTGGCGCTCATCCTTGGAACTCCCCTGGCCATTGGACTGGGCAC
CTATGCGGTGAAGAGCTGGACGGCTGCGTCCAAGGAGTTGGACGGGGAGA
AGAAGAGACCAAAGGCCAAGATCGAGAAGCAGGCCATCTCCCTGGACGGC
ACCGCACCGGACCAGGAGCTAGAGCGCAATCAAAAGTCCGCTGAGCTGGG
CGAGAAGCTGTCGCCTCTTAAGGAGGCCAACAACTACAAGACGGAGGGTA
ACAACTGCTACAGGAATGGGAAGTACGATGAGGCCATTAAATTCTATGAC
AAGGCCATCGACAAGTGTCCCAAGGAGCACCGCACTGACATGGCCATCTT
CTACCAGAACCGCGCCGCCTCTTACGAGATGCTCAAGAAGTGGTCCAACG
TCAAGGAGGACTGCACAGCCTCGCTGGAGTTCAATCCTCGTTACGCCAAG
GCATATTATCGTCGTGCCCGTGCTCACGAAGCCACCAAGGATATGAACGA
GTGCTTGGACGATGTCACAGCCACCTGTATCCTGGAGATGTTCCAAAATA
ATCAAACTATCATGTTCGCTGACCGTGTGCTCAAGGAGACCGGCCGACTG
GACGCCGAGAAGGGTATGCGCAATCGGGTGCCAGTCGTGCCGTCGGCTTG
CTTCGTAAACACCTACACGCGTTCCTTCATCGCGGATCCGCTGCAGACCA
TGAAAGTCCCAGCCCCTAAATCCGATGCACCCCCAAAGGGTTTCCTGCGC
GCCCACCTCGCTTTCCTCGAGGAGAAGTACGAGGAAATTATTCCCGCCTG
CACCGAAGAGATCGAATCCTCCGAGGCCGAAGCACAGTACAAAGTGGAGG
CTCTGCTTATGCGGGGAACTTTCCATCTGCTGTGCGGCTTCTATGTAGAA
AGCCAGCAGACTTTGATGCTATATAGCTAATGACTATGCTGATCCCAACT
GGCGTGGCGTATGCCTACAATAAAAGGCGGGGCAGCTTCTCTACATCAGC
TGGAATCAGCGCGAAAAGGTTTGCGATTGGCTGGAGGCGAACCGCCCTGG
ACCCGAAGA
FMO10128.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:51:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tom70-RC | 2297 | CG6756-RC | 260..1316 | 9..1069 | 5050 | 98.9 | Plus |
| Tom70-RB | 2237 | CG6756-RB | 181..1237 | 9..1069 | 5050 | 98.9 | Plus |
| Tom70-RA | 2218 | CG6756-RA | 181..1237 | 9..1069 | 5050 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:51:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12037155..12038130 | 982..9 | 4765 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:51:21 has no hits.
FMO10128.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:36 Download gff for
FMO10128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tom70-RC | 77..1152 | 1..1078 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:08:23 Download gff for
FMO10128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tom70-RA | 174..1249 | 1..1078 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:38:51 Download gff for
FMO10128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tom70-RA | 174..1249 | 1..1078 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:38:51 Download gff for
FMO10128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12037155..12038134 | 1..982 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:08:23 Download gff for
FMO10128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12037155..12038134 | 1..982 | 99 | | Minus |
