FMO10132.5prime Sequence
1140 bp (1015 high quality bases) assembled on 2010-11-05
> FMO10132.5prime
CAGTCGACATGGATAGAAATCCCGTGAGGCAGTCGACGTCATCCGGCACC
GTAGAAGGTGAATCCAGCGAACAGGAGGAGCAGAAGACGCCCAGTGCGGC
CGAATATATGAGGAACTTCAAGAACATCATAGCGCCGGGCAACGAGGCCT
CCATGACCAGGGAGTTCAATCCGCAGGTGGCATACGAATTCGAAAAGTAT
CTCAATCCGCAAAAGCTCAAGCAGCACGTCCTTAGGAGCGAGAAGCTGCG
ATCCATTCTGGAGCACTATGCCAAGGAGTCGGGCACGCCGCTCAAGCAGA
TGGAGCGTCAGGCCCGGGCGATCATTGATGAAATCGGCCTCGATCGGAAT
ATGGCCATCATCCGGTGGTGCGGCATTGCCATTACGGCGATCGGCAAGCG
GATCTGCGATGGATTCTATGTCAATTCGGCTAGCATGGCCAATGTGCGCA
AGGATATGGGCAAGTGCCCGGTGCTCTATCTGCCAAGTCATCGCAGCTAC
ATGGACTTCATCCTGATGTCCTACATCTGCTATTACTACGACATCGAGAT
ACCAGGAATAGCAGCCGGCATGGATTTCCACTCCATGTTCGGAATGGGCA
CCATGTTGAGGAAAACAGGAGCGTTCTTCATGCGCCGCAGCTTCTCCAAC
GATGAGCTATACTGGGATATTTTCCGGGAGTATATGTACGCGCTGGTGGC
AAACTACCACATCGGCGTGGAGTTCTTCATTGAGGGCACGCGCTCCAGGA
ATTTCAAAGCTCTGGTTCCCAAAATTGGACTACTCTCGATGGCTCTGTTG
CCATATTTCACGGGCGAAGTGCCGGATGTGATGATTGTGCCAGTGAGTGT
GGCCTACGAACGCGTCCTGAGGAGCAACTGTTCGTCTATGAGCTGCTGGG
TGTGCCCAAGCCCAAGGAGTCGACAATGGGCTTTTTCAAGGCCCTAAAAT
CATCGACGAGCGATTTGGCAAGATTGTTCCTCGACTTCGGAGAGCCCATC
TCGGTCAAGGAGTTTTCGACACGACAGCGCGCAACGAATGCAGCGAGCAG
GCGTGGGTGGTCACTTGCAAAGCTGAACCGCCAGGAGGTGAACTAGTCAA
AGCTGGCCCATGGAATTATTCTACAACGCACGTTCCATTG
FMO10132.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dhap-at-RC | 3516 | CG4625-RC | 356..1473 | 9..1119 | 5305 | 98.7 | Plus |
Dhap-at-RB | 3441 | CG4625-RB | 281..1398 | 9..1119 | 5305 | 98.7 | Plus |
Dhap-at-RA | 3516 | CG4625-RA | 356..1473 | 9..1119 | 5305 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25488524..25489088 | 573..9 | 2825 | 100 | Minus |
3R | 32079331 | 3R | 25487739..25488272 | 1101..573 | 2315 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:52:20 has no hits.
FMO10132.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:46 Download gff for
FMO10132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dhap-at-RA | 1..1111 | 9..1112 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:08:56 Download gff for
FMO10132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dhap-at-RA | 349..1466 | 1..1112 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:39:22 Download gff for
FMO10132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dhap-at-RA | 349..1466 | 1..1112 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:39:22 Download gff for
FMO10132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25487724..25488271 | 574..1113 | 97 | <- | Minus |
3R | 25488524..25489095 | 1..573 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:08:56 Download gff for
FMO10132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21313446..21313993 | 574..1113 | 97 | <- | Minus |
arm_3R | 21314246..21314817 | 1..573 | 99 | | Minus |