FMO10133.5prime Sequence
1136 bp (1046 high quality bases) assembled on 2010-11-05
> FMO10133.5prime
CAGTCGACATGTGGAGGCACACGATCCAAAGTACCAGGTACCTGGCAGGA
AACGCCTCGCTTTGCAGGCAAATAGCGACGCACAGTCCCAAACTGGGGGC
GGAAAGCAATCGCAGCAAGGAAAAGGCAAGTGAGAATGAGTCCTTTATGG
CCAACATCTTCCGTGGATCACTGGTGTCAAGCCAAGTGTTCCCGTATCCG
GATGTCCTGACCGCGGAGCAGAAGGAGCTGACCAACAGCCTGATAGATCC
GTTCGAGCGTTTCTTCTCCGATGTCAATGACGCTGCCCGCAACGATGCCA
ACTCTAAAATAGATGACACCACTTCGACGGCTCTGTGGGAGCTCGGGGCC
TTCGGAATCCAAGTGCCATCTGAATTCGGTGGCCTCGGTCTGAACAATAC
CCAGTACGGCAGGCTGTGCGCCATTGTGGGTGTCAACGATCTGGGACTGG
GCATCACGATTGGCGCCCATCAGAGTATTGGCTTCAAGGGAATACTGCTG
TACGGCACCCCCGAGCAGAAGGAGAAGTACCTGCCCAAGGTGGCCGCCGA
GCAGGTGTACGCTGCCTTTGCCCTTACGGAACCCAGCTCCGGATCTGATG
CGGGTTCCATTCGATGCCGTGCCGTGAAGAGTGCCGATGGAAAGCACTAC
GTCCTTAATGGCTCAAAAATCTGGATTTCCAATGGCGGAATTGCCGAAAT
TATGACCGTTTTCGCACAGACCGAGCAGGTGGACCCGAAGACTGGCGAGA
AGAAGACAAGGTCACTGCCTTCATTGTGGAACGATCCTTCGGAGGTGTAA
CCAATGGACCACCGGAGAAGAAAATGGGCATCAAGGCATCGAACACGGCC
GAGTGTATTTCGAAGATGTAAAGATTCCAATTGAAAATGTGCTCGGCAAG
GAAGTGATGGATTCAAGTTGCCATGAACATATTGACACGGTCGGTTGGAT
GGGCGCCACGCTTATCGGAACATGAAGATGCATCGAACAGCCACCGAGCA
TGCCACAATCGAGTTCAGTTTGTCAAAACTAAGAACTATGGATCATCAGA
GAATGTCGATGAACATTCTGCAGTACGCCCGAGTCATGGCGTTACTATTC
CAACATGAATGCCGCCAGACATTACCTGATCAGGCG
FMO10133.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7461-RC | 2274 | CG7461-RC | 53..1171 | 9..1099 | 4890 | 97.3 | Plus |
| CG7461-RB | 2013 | CG7461-RB | 53..1171 | 9..1099 | 4890 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19305224..19306250 | 9..1022 | 4500 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:52:23 has no hits.
FMO10133.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:47 Download gff for
FMO10133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7461-RB | 62..1183 | 9..1102 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:08:58 Download gff for
FMO10133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7461-RB | 53..1174 | 9..1102 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:39:24 Download gff for
FMO10133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7461-RB | 53..1174 | 9..1102 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:39:24 Download gff for
FMO10133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19305224..19306345 | 9..1102 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:08:58 Download gff for
FMO10133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15192729..15193850 | 9..1102 | 97 | | Plus |
