FMO10138.5prime Sequence
1133 bp (1031 high quality bases) assembled on 2010-11-05
> FMO10138.5prime
CAGTCGACATGAACTATGACGGCCTCCTTTCCAAGTTGACCGACGAAAAA
CTGATGCTCTTCGAAGCCGCCGGCGAGGGGACCATTGTAGAGGGTAGCCG
GATATGCGGCCAGGATGCGGATCCGCTCTCCTTGCCGCTGGTGGAGGACG
GCGCCATCGAGGAGGAGCAGGCGGCCCCCATACAGACGATTCATCGCACT
GTATTCGCCGTTCCACGCGTCCCTTCCCCCTCCCCCGTAAGCACATCAGG
TGCCAATCTGAACCTCAAGACGGAAAACGCTGCGACAGCGACTCCGCAGC
GCAAAATATCGACGTCATCACGTTTCATGAACGCCTTCAGTCAGCTCTAC
GGCGGCGGCAACAGCGGTCCGAGCTGCGGTCACGTGGAGCAGCACAACGA
GGAACCCGGTGACCTGTCGGCAAACCGTACTCCCACCAAGGGCATGGAGT
CCAAGCTCGTCGCAATGTGGCACAATGTGAAGTATGGCTGGAGCGGCAAG
ATGAGGCAGACCAGCTTCTCAAAGGAGCAGCCCGTGTGGCTGCTAGGACG
GTGCTATCATCGACGCTTTACTCCGCCCGTAAGCATGGAAAGTTCCATCA
CCGAGCTGCCCAGCGGGGCGGATACCACCCCCGATAACGCCACATCGGCG
TTCGACAGCATTCAGGCCACATCGACATCAACCTCCTTGTATCCAGCCCT
TAATCCGCAGCAGATCGATGAGATTGTGGTGCCCCAGGAACTGGGAATGG
ACGCGGTGGAGAACCAAGTGGGCGAACAGCCTTGGGAGGAGGGCATCGAA
AGCTTTCGTCGTGACTTTTACAGTAGGATTTGGATGACCTACCGTCGAGA
GTTCCCAATAATGAATGGCTCCAACTACACCTCGGACTGCGGTTGGGGCT
GTATGCTAAGAGTGTTCAGATGCTCTTCGCTCAAGACTCATCTGTCACTT
CCTAGGCGAAGCTGGCGCTATGATTCAGAGTCCCAGTTGCACCTCGACTT
ACGAGACAATATTGCATAAGAAAGATCGTCAAGTGGTTCGGGGACGTCCC
TCAAAAAGCAGTTCTTCTTCAATCAGTCTGGTGCGGCTGGGGGAGACATT
GGTTAAAACTTGGCGAATGGTACGTTCCGGCCC
FMO10138.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atg4b-RA | 2665 | CG6194-RA | 109..1239 | 9..1132 | 5115 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15355679..15356628 | 956..9 | 4620 | 99.6 | Minus |
| 3R | 32079331 | 3R | 15355515..15355615 | 1062..961 | 260 | 90.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:52:45 has no hits.
FMO10138.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:50 Download gff for
FMO10138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6194-RA | 104..1208 | 9..1108 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:09:08 Download gff for
FMO10138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6194-RA | 109..1213 | 9..1108 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:39:33 Download gff for
FMO10138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atg4b-RA | 109..1213 | 9..1108 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:39:33 Download gff for
FMO10138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15355674..15356635 | 1..960 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:09:08 Download gff for
FMO10138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11181396..11182357 | 1..960 | 99 | | Minus |
