FMO10144.5prime Sequence
1119 bp (1030 high quality bases) assembled on 2010-11-05
> FMO10144.5prime
CAGTCGACATGGTCGTGTCCACTTTGCACATAACGCTGGAGAACAACGGC
AATGTTGCTGCGGGGCAGCCTGCTGCCGTTGCTGCTGCCAGTGTCGTTGG
GGCAGCAACATCGCCGACCAAGTTTGCCGTGCTGTCGGCGCAGCAGCTGC
AACTGCAACTGCAGCAGCAGCAGCAGCAGCAGAACGAAAAGGAGAACCAT
ATGAACAATAATAACAATAACAGCGACTATTGTGATATGAATGGCAATGG
AGTTGGAATGGGAAACGGTGGTAGTGGTGGACCGGGATCTCTGACCCCCC
AATCCCCCGACCAATATGTCGGCTCACCTGTATCATCCGCTGCCACGCCC
CAGCGCACCGCCTCCGCCCTGCGTCGCGGCATTCAAATTCAACGATCCTC
GACGCGTTTGCGACAACAACAGGAGCAACTGCGCCGACGACGCGAGGAGG
AGGAGCGCATAGCGCAGCAAAATGAATTCCTGCGGAACAGTCTTCGTGGC
TCCAGGAAGCTGAAGGCGCTTCAGGATACGGCTACGCCCGGTAAAGCGGT
TGCCCAGCAGCAGCAGCAGGCAACGCTGGCCACCCAGGTGGTTGGCGTGG
AGAATGAGGCATATCTGCCCGACGAAGACCAGCCGCAGGCGGAACAGATC
GATGGCTATGGCGAACTGATAGCGGCCCTTACCCGCCTGCAAAACCAGCT
GAGCAAGAGCGGACTGAGCACGCTGGCGGGTCGCGTTTCGGCCGCCCACA
GTGTCCTGGCCAGCGCCAGTGTGGCCCATGTCCTGCCCGCTCGCACCGCA
GTACTGCAGCGACGACGTTCCCGCGTCTCTGGTCCACTGCATCACAGTTC
CCTCGGATTGCAGAACGACATTGTGGAGCTGCTAACGCAATCGAATACGG
CGGCGGCCATCGAGCTGGGCAACCTGCTGACCAGCCATGAAATGGAGGGT
CTGCTACTGGCCCACGATCGCATTGCCAATCACACGGATGGCAACGCCCT
CGCAACGCCCACGCCCACTCCGGCAATTGGAGCGGCGACGGATCGACACT
CAGCAGTCCGGTGGCCTGAACCAATAGAATCTAGTATGGTGGTTCCACGG
CCCTGGTACACCGCCCATG
FMO10144.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
sdt-RK | 3790 | CG32717-RK | 170..1281 | 9..1115 | 5270 | 98.7 | Plus |
sdt-RD | 3838 | CG32717-RD | 218..1329 | 9..1115 | 5270 | 98.7 | Plus |
sdt-RN | 5650 | CG32717-RN | 2441..3141 | 420..1115 | 3215 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8232493..8232907 | 9..423 | 2075 | 100 | Plus |
X | 23542271 | X | 8235881..8236307 | 654..1079 | 1900 | 97.9 | Plus |
X | 23542271 | X | 8235585..8235821 | 419..655 | 1185 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 16:53:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6817 | 167..70 | 116 | 59.2 | Minus |
FMO10144.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:53 Download gff for
FMO10144.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sdt-RD | 208..1295 | 1..1084 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:09:18 Download gff for
FMO10144.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sdt-RD | 208..1295 | 1..1084 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:39:45 Download gff for
FMO10144.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sdt-RD | 208..1295 | 1..1084 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:39:45 Download gff for
FMO10144.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8235592..8235820 | 426..654 | 100 | -> | Plus |
X | 8232483..8232910 | 1..425 | 98 | -> | Plus |
X | 8235882..8236313 | 655..1084 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:09:18 Download gff for
FMO10144.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8126516..8126943 | 1..425 | 98 | -> | Plus |
arm_X | 8129625..8129853 | 426..654 | 100 | -> | Plus |
arm_X | 8129915..8130346 | 655..1084 | 97 | | Plus |