FMO10146.5prime Sequence
1141 bp (1008 high quality bases) assembled on 2010-11-05
> FMO10146.5prime
CAGTCGACATGGGAGCCACTAGGAATGGCAAGTCCCTTTCGGGGTCTGAG
AACCTAATAATCGAGGTGGATGAGGACAAGATCCGTTGCAAGCAGTATTC
CTGGTACTTTGCCCCCATCTACCTCCTGTTCTGGGTGGGTCTCTTCTTCG
CCGTCATATATCCACTTTTCCAGGCCTTGCCCACCGGAATCAAAATCTCC
GAGGAGGCGGATAAACCGGGACAATTCGTGGCCGAGAGAGCTCAGGAAAT
ACTGCTGCAAATAAGTCGATTGGGACCCCGTGTGGTGGGTGATGTTGATA
ATGAAGTCACAGTTGTGAATTTGCTGCTCGCTGAAATCGAAAAAGTGCGC
CAGGTGCTGCGAGACGATGTCTATGAAATGGAGGTGGAGGTGCAACGGGC
ATCCGGATCCTACTTGATCAAAGGCCTAACGAATCACTATCAGGGTGTGC
AGAATGTGATCGTTAGACTGAGTACGAAGAGCTCAAATAGCACCTCCTAC
CTTTTGGTCAATAGTCACTACGATACCAAGCCGGGTTCACCTGGTGCCGG
AGATGATGCTGCCATGGTTGTCGTAATGCTGGAGGTACTGCGTCTGGTCG
CCGTTTCAGGGGATCCCTTCCTGCATCCGATTATATTCCTTTTCAATGGT
GCCGAAGAGCAGCCAATGCAGGGATCACATGGTTTCATCACGCAGCACAG
ATGGGCTGCCAACTGCAAGGCTCTACTGAACTTGGATTCCGCTGGCGCTG
GTGGACGTGATTTGCTCTTCCAGGGCGGTCCCAATCATCCCTGGCTGATG
GAGCATTACAGAAACAGTGCCCCGCACCCGTTCGCCACCACAACGGCCGA
GGAGATGTTCGAGGCTGGTATCATACCATCGGATACTGATTTCCCGGATC
TTTCGGGACTTTGGAGTTGTGCCAGGCTTGGACATGGCCGGCGTGTACAT
GGATTCGTTTATCACAACGAAATTCGATCCGCTACGCGGTGATAGTCCTC
GATTCCCTGCAGAATCCGGCGACAATTAACTGGCCTTGGTATGGGAGTAT
TCGATGCCGAGAAATGTACGAAACAGAAAGGCCCACCGCCGAGGAATGCA
GATCTCTCGCACTTTATTGGAACTGTCTTGTCAATAACAGG
FMO10146.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13160-RA | 2733 | CG13160-RA | 69..1138 | 9..1077 | 5070 | 98.8 | Plus |
CG13160-RB | 2736 | CG13160-RB | 69..1141 | 9..1077 | 5030 | 98.5 | Plus |
CG33012-RC | 2849 | CG33012-RC | 604..1114 | 456..966 | 495 | 74.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12371764..12372279 | 31..546 | 2580 | 100 | Plus |
2R | 25286936 | 2R | 12372332..12372508 | 543..719 | 885 | 100 | Plus |
2R | 25286936 | 2R | 12372808..12372931 | 802..926 | 575 | 99.2 | Plus |
2R | 25286936 | 2R | 12372564..12372648 | 719..803 | 425 | 100 | Plus |
2R | 25286936 | 2R | 12372993..12373114 | 923..1044 | 360 | 93.5 | Plus |
2R | 25286936 | 2R | 12368340..12368411 | 729..800 | 195 | 84.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:52:27 has no hits.
FMO10146.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:47 Download gff for
FMO10146.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13160-RA | 67..1145 | 9..1089 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:09:00 Download gff for
FMO10146.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13160-RA | 69..1147 | 9..1089 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:39:25 Download gff for
FMO10146.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13160-RA | 69..1147 | 9..1089 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:39:25 Download gff for
FMO10146.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12372564..12372648 | 719..803 | 100 | -> | Plus |
2R | 12372810..12372930 | 804..925 | 99 | -> | Plus |
2R | 12372996..12373151 | 926..1081 | 91 | == | Plus |
2R | 12371662..12371685 | 9..32 | 100 | -> | Plus |
2R | 12371766..12372276 | 33..543 | 100 | -> | Plus |
2R | 12372333..12372507 | 544..718 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:09:00 Download gff for
FMO10146.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8259167..8259190 | 9..32 | 100 | -> | Plus |
arm_2R | 8259271..8259781 | 33..543 | 100 | -> | Plus |
arm_2R | 8259838..8260012 | 544..718 | 100 | -> | Plus |
arm_2R | 8260069..8260153 | 719..803 | 100 | -> | Plus |
arm_2R | 8260315..8260435 | 804..925 | 99 | -> | Plus |
arm_2R | 8260501..8260656 | 926..1081 | 91 | == | Plus |