FMO10147.5prime Sequence
1148 bp (1035 high quality bases) assembled on 2010-11-05
> FMO10147.5prime
CAGTCGACATGGACGAGCGGGAGAGTCTGTACTTCGACACCATATCGCTG
GCGGAATCGGAGGCGGCGGCTGCTGCGGCGGCGCATCGCAAGTCGATCTC
GCAGTCGCGCAACACCATCTACCACTCGGCGGTCGATCTGGCGGGCGATG
AGGGAGGCGGAGGAAGCGGTGGAGGAAGGCTGCGTCTGGGCGGCGGAGCA
GCCGCCGAGCACGCAGCGCTTGCCTGGCAGCCTGGATACCGTCAGTCCAC
AGCACTGGAGCACCTCAATGGCGGCGGTGGTGGTGGTGGTGATCACACGG
ATGCCGCTATCGCCGCCCAAATGATTGCCCTGCAAAACGGACGAAACCAC
CTGCCCACCGGGATCGGTGTGACCGGAGATGGAGGACAAGGAGGTGGTGA
CGATGAGACATACAGACGCTTCGACGATGGCAAACGGAGCGTGGACTTTG
TGCTGGCTTACAACGGAGAGACGCAGCTGGAGGAGCATCGGCGCAAATGC
GAGATCTTTGAGGCGAATCTGCAGCGAGAGGGCTTGCAGCTGGAGCACAA
CAAGGTGCAGCGCGTCCATTTCATCAAGATCCATGCGCCGGCGGAGGTGC
TGTACCGCTATGCGGAAATACTCAAGATTAAGGTGCCGCTCAAACCGATT
CCCGGCCAGGATCAAATCTTCGCCGAATCGGCGCACGAGTTCAAGACCTG
CTTCAGTCGCATGTGCAAAAGTCTCTTCAGCTCCGTCCAATTGAATACGG
CCCTGTTTCCGGAACGCGAACCGCGCATCCATCTGGAGTTCTCCCGCAAC
TACCTGGAACTGTACGATACGGAGCACCCGAACTTTCTCGACGCCAGCAC
CCGCTACTCCATCATCAATTTCATTCTCCAGCGCCAGCGTTTCGTGGAGG
GCGAGGAGACGGCCGACAATCTGGGCATCGAGAGCTCGTCCAGGATGGCG
TAATATACCTGCGCCTACACCTTGCATGATAAAGACGATCGGCGATCGGC
TGCTAAGGGTGGGGCCACATATTCCAAGTGGAAGAACCTGCAACCACTGG
ACCAAATTAAAGACTACTTTGGGAGGCAAAGTGGCACTCTACTTTGCTGG
CTGGGAATTCTACCACGCAATGCTGATACCATAGCGGTGTTCCGGCGT
FMO10147.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10353-RK | 4482 | CG10353-RK | 522..1642 | 9..1130 | 5270 | 98.6 | Plus |
| CG10353-RI | 4771 | CG10353-RI | 811..1931 | 9..1130 | 5270 | 98.6 | Plus |
| CG10353-RC | 4203 | CG10353-RC | 243..1363 | 9..1130 | 5270 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11881330..11881904 | 980..406 | 2765 | 99.5 | Minus |
| X | 23542271 | X | 11883188..11883586 | 407..9 | 1995 | 100 | Minus |
| X | 23542271 | X | 11880867..11880926 | 1097..1037 | 210 | 93.4 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:52:32 has no hits.
FMO10147.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:48 Download gff for
FMO10147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10353-RC | 230..1378 | 1..1148 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:09:02 Download gff for
FMO10147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10353-RC | 233..1381 | 1..1148 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:39:27 Download gff for
FMO10147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10353-RC | 233..1381 | 1..1148 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:39:27 Download gff for
FMO10147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11883188..11883591 | 1..407 | 99 | | Minus |
| X | 11881330..11881902 | 408..980 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:09:02 Download gff for
FMO10147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11775363..11775935 | 408..980 | 99 | <- | Minus |
| arm_X | 11777221..11777624 | 1..407 | 99 | | Minus |
