FMO10149.5prime Sequence
1104 bp (1012 high quality bases) assembled on 2010-11-05
> FMO10149.5prime
CAGTCGACATGGAGGCCACTGATCAGGAGGTCATGCTGGAGGGCAGGGAA
GACCTCATGTCCACATCGGCGACATCGTCCACAAATGGCGGGGACACTAA
TGGTTGCGGCAAAAAATTGTCCGTAACCTCTCCGGATCCCACACCGTACG
TGACCAAGCAGCGAGTGACGCGTCCAACGCCTCCCGCTCCTTCAAAGAAT
CCGATGCAATTCGTCCAGATCAAGCCCTGCAACCTCTACCAGACCGCGCA
GGAGCAGCTGAAGAAGGCCGAGGAGGTCAAGAAGCTGAAGGAGGTGAAGA
AGGAGGAGCCAGAGGAGTGGCAGAACAACCTTGACAATTGGAAATCATCG
AGACGAAAACGTGTCGAACACATCATCGATCGAGCGGTGGAGACCAAGAA
ACTCGAGCTGGAGGAGCATGATCGGTTGCGCCGAAAGTCGAAAACATTCA
CCGAAATGATGGAGGAGAGGGCTGAAAGGGGCGGACCTCGGGGGCGTGCC
AAGCTGGCTTCCCTGGCCGTATACAACGAGGATGAGACGAACGACCTGAG
TGATTTGGGGATCGGAACCAGCAGTGCCAGCGGAAAGAGCAGCCTGTCCG
GGGACTATGACAATAACAGTGTTATGAGCGACCATGCGGCGGAGCTGGAT
AAGGCGATTGGAGCAGCTAGCTCTGTAGCTGCTGGAGTAACCGCCCAAAA
CGTGGATGAGCAGCTGAATCACATAAACCGCAACGGTAGTAATGGGAACC
ACGGGAACGGAGCGGCTGTTGGCCAGACAGGACCATCAAATTCCTCCAAG
TCAGCACGGCGGCAATACATCTCCTCGCCAGGATACGATACGTCCTCCAG
TAACGCGCAAGCCAGTTCTCCGGATCTCTGTGAATACACCTACGAAGGAG
CCATCCAGGACTACAAGCAAAGAGTTCAACGGGCCAGCAGCAATGGCAAT
GGAAATGCCAACGGCAAGTTGATTGAGAACATATTGCTTATCCCACGAGG
CGAGGCTCTTAAATGAGAATCGATTGATTGCTTGAGGTAACATCGCCAGC
GACACGCCAGGAGGGTGTAAGGAGCCAAAGGTGACTGCCCAAGTGACTAT
CCCA
FMO10149.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43427-RH | 6180 | CG43427-RH | 614..1705 | 9..1093 | 5130 | 98.4 | Plus |
CG43427-RG | 5552 | CG43427-RG | 831..1922 | 9..1093 | 5130 | 98.4 | Plus |
CG43427-RF | 5897 | CG43427-RF | 1176..2267 | 9..1093 | 5130 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4701157..4701604 | 626..1069 | 1890 | 97.3 | Plus |
3R | 32079331 | 3R | 4698048..4698255 | 119..326 | 1040 | 100 | Plus |
3R | 32079331 | 3R | 4700169..4700327 | 468..626 | 795 | 100 | Plus |
3R | 32079331 | 3R | 4699717..4699860 | 327..470 | 720 | 100 | Plus |
3R | 32079331 | 3R | 4697432..4697542 | 9..119 | 555 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:53:25 has no hits.
FMO10149.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:56 Download gff for
FMO10149.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31531-RC | 818..1918 | 1..1093 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:09:27 Download gff for
FMO10149.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43427-RF | 1167..2267 | 1..1093 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:39:55 Download gff for
FMO10149.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43427-RF | 1167..2267 | 1..1093 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:39:55 Download gff for
FMO10149.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4697423..4697542 | 1..119 | 96 | -> | Plus |
3R | 4698049..4698255 | 120..326 | 100 | -> | Plus |
3R | 4699717..4699859 | 327..469 | 100 | -> | Plus |
3R | 4700171..4700327 | 470..626 | 100 | -> | Plus |
3R | 4701158..4701601 | 627..1065 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:09:27 Download gff for
FMO10149.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 523145..523264 | 1..119 | 96 | -> | Plus |
arm_3R | 523771..523977 | 120..326 | 100 | -> | Plus |
arm_3R | 525439..525581 | 327..469 | 100 | -> | Plus |
arm_3R | 525893..526049 | 470..626 | 100 | -> | Plus |
arm_3R | 526880..527323 | 627..1065 | 97 | -> | Plus |