FMO10151.5prime Sequence
1127 bp (1042 high quality bases) assembled on 2010-11-05
> FMO10151.5prime
CAGTCGACATGGATTACGTGTATTGCGGCACCGACCCCATCGGGGCCTCC
GAAGACATACTAAGTGTTTATGACGCGGGATCTGCGCCGGGAAACGGGCA
CTTTTCGCCCAGCTTCAATGGATTCAACATCGGCACCACCGATCCGGAAT
ATGTGGAGCTTGTGCCCGTGCTTGCCGACGGCGGGGAGCACTTCGGCGTT
TCCAGCGTGGCGTTCGACGACTACGAAGAGCTGCTGTGGATGGGCAACCA
GGGCGGCCACGTCACATCGTACTACACAAACTCCATGCAGAAGTACACAT
CCTTTCAGGTCCACGCCACCGACATTGTGCGCGACATCTCCACCCTGGAC
TCCGGAGTGCTGGCGCTCACGCAGACCTCGCTGCGTCATCAGATCCGCAG
GGGTCTGCCCAAGTTTACCTTCAAATCGAACAACATGAAGGAGATGGTGA
GCATGCTGCAGCTATCACCGCATCGTCTGGTCATGGCCGGACTGCAGGAC
GAGCTTATCGACTTCGACCTGCGCACGCTCAAGGAAACCCGCATAGAGCA
TGTGGGTGCCGGCGGATGCACGGTGCTACGCAAGAATTCACGTTATCTGT
TTGCCGGCGACCAGCTGGGAACGGTAACGTTGCGCGACCTGAACAGCCTG
AGTGTTCAGCACACAATCAAGACGCACACCAACATCCTTTCGGACTTCAG
TGTCCAGGGAAATCTGCTAATCTCTTGCGGCTACAGCGGAAGGCAAAATA
ACCTGGCCATCGACCGCTTCCTAATGGTCTACGATCTGCGCATGCTGCGC
CTGATCGCGCCCATTCAAGTGATGATTGATCCGCAGATGTTGAAGTTCCT
GCCATCGCTGACATCCCAACTGGCCGTCGTGTCCAGCTACGGCCAGGTTC
AGCTGGTGGACACTGTGGAGCTCAGCGAGCCGCGAGTATCCATGTACCAG
ATCAACACCAACGGCAGCAGTGCCTCAGCTTCGACATTAGCCTCCCTCTT
CACAAGCCATGGCATTTGGGGAACAGTCGGGCCCATCAACATGATGCGCT
GTTACAACGCCCTCAGCCGCAGGTCCATTTCTACTCCCGGAAGCCAAGGT
TGCGAGACGTGGTGCCAAGCTGCGAAT
FMO10151.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
PAN2-RB | 4048 | CG8232-RB | 132..1248 | 9..1123 | 5160 | 98.1 | Plus |
PAN2-RA | 4051 | CG8232-RA | 132..1248 | 9..1123 | 5160 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8928936..8929556 | 425..1045 | 2905 | 98.9 | Plus |
2R | 25286936 | 2R | 8928458..8928649 | 64..255 | 960 | 100 | Plus |
2R | 25286936 | 2R | 8928709..8928878 | 255..424 | 850 | 100 | Plus |
2R | 25286936 | 2R | 8928300..8928357 | 9..66 | 290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:53:29 has no hits.
FMO10151.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:57 Download gff for
FMO10151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8232-RA | 121..1247 | 1..1127 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:09:31 Download gff for
FMO10151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8232-RA | 126..1252 | 1..1127 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:39:57 Download gff for
FMO10151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PAN2-RA | 126..1252 | 1..1127 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:39:57 Download gff for
FMO10151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8928458..8928648 | 64..254 | 100 | -> | Plus |
2R | 8928709..8928878 | 255..424 | 100 | -> | Plus |
2R | 8928294..8928354 | 1..63 | 93 | -> | Plus |
2R | 8928936..8929640 | 425..1127 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:09:31 Download gff for
FMO10151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4815963..4816153 | 64..254 | 100 | -> | Plus |
arm_2R | 4816214..4816383 | 255..424 | 100 | -> | Plus |
arm_2R | 4815799..4815859 | 1..63 | 93 | -> | Plus |
arm_2R | 4816441..4817145 | 425..1127 | 96 | | Plus |