Clone FMO10156 Report

Search the DGRC for FMO10156

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:101
Well:56
Vector:pMK33-CFH-BD
Associated Gene/TranscriptRat1-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10156.5prime Sequence

1137 bp (1000 high quality bases) assembled on 2010-11-05

> FMO10156.5prime
CAGTCGACATGGGAGTTCCAGCATTCTTTCGCTGGCTGAGCCGGAAGTAT
CCATCCGTGATAATAGAATGCAATGAAAACAAGCAGGTGGACGCGGACAC
CGGTCGAAACATCTACGAGGACCCCACCTTGCCGAATCCAAATGGGATAG
AGTTTGACAATCTGTACCTGGACATGAACGGCATCATCCATCCGTGCACG
CATCCGGAGGACAAGCCGGCGCCGAAGAACGAGGACGAGATGATGGTGGC
CATCTTCGAATGCATCGACCGTCTGTTCGGTATTGTACGTCCTCGAAAAC
TGCTCTATATGGCCATCGATGGCGTTGCTCCACGAGCCAAGATGAATCAG
CAGCGATCTCGTCGCTTCCGAGCGGCCAAGGAAACCACCGAAAAGCGGCT
GGAGATAGCACGGATCCGCGAGGAGCTGCTGAGCCGCGGCTGCAAGCTGC
CACCGGAGAAGGAGAAGGGTGAACACTTTGACTCCAACTGCATCACGCCG
GGCACCCCGTTCATGGACCGACTGAGCAAGTGTTTGCACTACTTTGTTCA
TGATCGTCAAAACAATAACCCGGCCTGGAAGGGCATCAAGGTGATCCTGT
CGGACGCCAATGTGCCCGGTGAGGGTGAGCACAAGATCATGGATTACATT
CGCAAGCAGCGTGCCCAGCCTGATCACGATCCCAACACGCAGCACGTCTT
GTGCGGAGCCGACGCCGATCTCATCATGTTGGGTCTGGCCACGCACGAGC
CCAACTTCACAATCATTCGGGAGGAGTTCCTGCCGAATAAGCCGCGTCCC
TGCGACATCTGCAACGGATTTGGCCACGAGATGGACAAGTGTGTCGGACT
CGGAGCGACTGCGCCAACTAGCGCCAATTTTAAGCCCGATGTGCCCATAG
GCGCCGAGGTAAAGTTCATCTTTGTGCGGCTGAGTGTGCTACGCGAGTAC
CTAAAGCAGACTTTTGAGATGCCGAATTTGCCATTTGGAGTACCAGTTTC
GAGGCGCGCGGTTGGACGACTGGGTGTTCATGGTGCCTTCCTTTGTTGGC
AATGATTTCTTGCCCACTGGCTTAGCCTTGAGAATTCCGGAAGGGTGCAT
TAAATCGATTGGTGGGAGTTATACAGGAATGCGTTAC

FMO10156.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:46
Subject Length Description Subject Range Query Range Score Percent Strand
Rat1-RB 2975 CG10354-RB 84..1202 9..1135 5135 97.7 Plus
Rat1-RA 3341 CG10354-RA 84..1202 9..1135 5135 97.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6908166..6909185 9..1032 4890 99.4 Plus
Blast to na_te.dros performed on 2014-11-26 16:53:45 has no hits.

FMO10156.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:59 Download gff for FMO10156.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10354-RA 80..1201 9..1137 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:09:40 Download gff for FMO10156.5prime
Subject Subject Range Query Range Percent Splice Strand
Rat1-RA 84..1205 9..1137 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:40:03 Download gff for FMO10156.5prime
Subject Subject Range Query Range Percent Splice Strand
Rat1-RA 84..1205 9..1137 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:40:03 Download gff for FMO10156.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6908166..6909287 9..1137 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:09:40 Download gff for FMO10156.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6908166..6909287 9..1137 97   Plus