FMO10160.5prime Sequence
791 bp (791 high quality bases) assembled on 2010-11-05
> FMO10160.5prime
CAGTCGACATGTCCGAAGATGCCAAGAGTCCAGGACCACGCACACGGAAC
ATCATCGAGAATCAGCTGTTCCGCCGGCAGCGTAGCCTAAAATTGGAGGC
ACTGCAGCGCCAGCGGACCTTGGATTCCAACGATGGGGTGGAGGGATTGG
GCGCAGATACGGAACCCTTCGACAAGACGCACATCGTCATCATCTTTACG
GAGAAGGCCAAGCTAAGACACTGTCAGGATGTGGAGAAGATCATTCAGGA
GTTTGGCATCCAGACCACGCTGGAGATCGTAGGGAAAACCGAAAAGTATC
TCTACCTATCGGCCAGCGTGGATACTCTGCTCCGTTTGGCCGATGCCGCC
GAGCTGGAGAAGATGACCACCACGCACAGCATGCAAAAGTTCAATCACGG
CTGCATCTCGGACTTTCTACTGCCCGGGATGGGCAAAGAGCAGATCCTGC
GCTACTGCGAGATACCTGTTCTCATCAAGGACGTAATCCAGGACGGCATT
AAGTCCTACGTGCAAAAGGGCTACATAGAGGATATGTTTCCCCTCCACGA
TATCCTGTATCTCGAACGCTTCAACTGGAACCTGAAACGCACCAAGCTGC
CCATCGAGGACATCCGGAACTACTTTGGTTCCAGTATAGGTCTTTATTTC
GGCTTCATCGAGTTCTACACGAAGGCACTGATCTTTCCCTCCCTTTTTGG
TATACTCCAATATGTATTCGATCTGAACATCTCGCTGGTCTGCAGTTTCT
ACGTTGTTTGGACCACGGTGAGTGCAAGCTTTCTAGACCAT
FMO10160.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Axs-RA | 2575 | CG9703-RA | 456..1214 | 9..767 | 3795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16682201..16682472 | 554..283 | 1360 | 100 | Minus |
X | 23542271 | X | 16681904..16682122 | 773..555 | 1095 | 100 | Minus |
X | 23542271 | X | 16683209..16683357 | 176..28 | 745 | 100 | Minus |
X | 23542271 | X | 16683026..16683135 | 284..175 | 550 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:53:22 has no hits.
FMO10160.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:55 Download gff for
FMO10160.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Axs-RB | 447..1226 | 1..781 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:09:26 Download gff for
FMO10160.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Axs-RA | 447..1214 | 1..767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:39:53 Download gff for
FMO10160.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Axs-RA | 447..1214 | 1..767 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:39:53 Download gff for
FMO10160.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16681898..16682122 | 555..781 | 98 | <- | Minus |
X | 16682201..16682471 | 284..554 | 100 | <- | Minus |
X | 16683027..16683133 | 177..283 | 100 | <- | Minus |
X | 16683209..16683357 | 28..176 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:09:26 Download gff for
FMO10160.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16577242..16577390 | 28..176 | 100 | <- | Minus |
arm_X | 16576234..16576504 | 284..554 | 100 | <- | Minus |
arm_X | 16577060..16577166 | 177..283 | 100 | <- | Minus |
arm_X | 16575931..16576155 | 555..781 | 98 | <- | Minus |