FMO10162.5prime Sequence
1003 bp (1003 high quality bases) assembled on 2010-11-05
> FMO10162.5prime
CAGTCGACATGACCGCCTCACCGGGTCTTCTGCACATGGATCAACCGCTC
AGAGCCATCTATCAATTCTTACTCGACTTGCTAGTGTTTACGATTAAATC
GGTGTACTACGTACTCGAATCGATTTACTACAGTCTGTTGCCGCAGCGCT
TTCGAAAGTTAAAGGACATCTCCGGCCAGGTGGTGCTCATCACAGGAGGA
GGCGGTGGTGTTGGACGTTTGATTGCCCTAAACTTTGCTCGCCTTCAGGC
CCGCATTGTCATCTGGGATATAAATCAAGAAGCCATAAAGACAACTGTGG
ATTTGTTGGCCAAACATGGTTATGACAACTGCAAGGGCTACGTTGTGGAC
ATCTCAGATCGGGAGCAGATCTACCAGCGTGCCAGCCAGGTGACCGAGGA
GGTTGGTCCCGTCGACATATTGATTAACAATGCCGGTATCGTGTGCTGCA
AACCCTTCTGGGAGCTGCACGATCGGGTCATCCAGAACACGTACAACATT
AACATCATATCGCACTACTGGACCGTGAAAGCGTTTCTGCCTCACATGAT
GCGCAATAATCGTGGTCATATCGTTACTGTGGGCTCGGTAACTGGAATGC
TGGGCACCTACGGATGCAGTGACTACGCGGCCACCAAATACGCCTGCATC
GGTTTCCACGAGAGTTTGCTCACCGATCTGAAGGCCCATGGCTATGATCA
AATCCAAATGAGTTTGATCTGCCCGTACTACATCAACACGGGCATGTTTT
CGGGTGTTCGGCCGCGGATGATGCCCATGCTGGAGCCGCAGTATGTGGCG
GATCGCATCGAGAACGCCGTGCGCTGCAACGAGGTGTGGTGCGTGCTGCC
CAACTCTATTCGCCTGCTCACTCCTCTCAATGTCTTTTGCCCGCCAAATG
TGCTGGGAGCTGATGTCGCGTGTCATCCGTGGACCCGAGTCTATGATGAT
GGTTTCAGGGACGAGGGCGCGTCGCCGCTGGTGCAAGCTTTCTAGACCAT
TCG
FMO10162.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15629-RA | 1432 | CG15629-RA | 345..1320 | 8..982 | 4810 | 99.7 | Plus |
CG3225-RA | 2387 | CG3225-RA | 2221..2321 | 982..882 | 460 | 98 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 4815021..4815620 | 281..880 | 3000 | 100 | Plus |
2L | 23513712 | 2L | 4813353..4813510 | 8..165 | 790 | 100 | Plus |
2L | 23513712 | 2L | 4814768..4814887 | 163..282 | 600 | 100 | Plus |
2L | 23513712 | 2L | 4815679..4815779 | 882..982 | 410 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:54:01 has no hits.
FMO10162.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:13:02 Download gff for
FMO10162.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15629-RA | 323..1307 | 1..986 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:09:50 Download gff for
FMO10162.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15629-RA | 339..1323 | 1..986 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:40:10 Download gff for
FMO10162.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15629-RA | 339..1323 | 1..986 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:40:10 Download gff for
FMO10162.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4813347..4813509 | 1..164 | 98 | -> | Plus |
2L | 4814770..4814887 | 165..282 | 100 | -> | Plus |
2L | 4815023..4815623 | 283..882 | 99 | -> | Plus |
2L | 4815680..4815782 | 883..986 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:09:50 Download gff for
FMO10162.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 4813347..4813509 | 1..164 | 98 | -> | Plus |
arm_2L | 4814770..4814887 | 165..282 | 100 | -> | Plus |
arm_2L | 4815023..4815623 | 283..882 | 99 | -> | Plus |
arm_2L | 4815680..4815782 | 883..986 | 96 | | Plus |