Clone FMO10173 Report

Search the DGRC for FMO10173

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:101
Well:73
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG17770-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10173.5prime Sequence

518 bp (518 high quality bases) assembled on 2010-11-05

> FMO10173.5prime
CAGTCGACATGGATTTCGAATTCCTTACTCCGCCGCCAGAGGAACGGACC
ATTCGCACCCACAATCTGACCGAAGAACAGGTCAAGGATTTGGAGATTGC
CTTTTCCCTGTTTGACGACCAAGACACTAAGGTTATTCCTATAACAAATC
TCAGGCAACTAATGCTGTCTGTGGCCCACTATCCCAGTGATATGGAATTG
CAGGAAATTCAGGCCGAGATCGATGCTGATGGATCCGGTGAGTTATATCT
CAGCGATTTCCTTCACATCATGTCTCAGAGGTACGCAAACATGTCTACCG
AGGATGAAATTATAGCTGCATTCAGAGTCTTTGACAAAGAAGGAACCGGC
TTAATATCTGAATCGGAATTTCGTCACATAATGCAGAACATGGGGGAGCA
ATTGACGGATGATGAGGTGGAGGAGATCATCCGTGATGCAAATTCTTTTT
TGGAAGGCAATATAGACTATGTGCGATTTGTCAGAATGATGTCCACTACA
GCAAGCTTTCTAGACCAT

FMO10173.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:35
Subject Length Description Subject Range Query Range Score Percent Strand
Acam-RB 1224 CG17769-RB 78..570 8..500 2435 99.6 Plus
CG17770-RA 1224 CG17770-RA 78..570 8..500 2435 99.6 Plus
CG5024-RB 643 CG5024-RB 318..460 214..356 190 76.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25811988..25812480 8..500 2435 99.6 Plus
3R 32079331 3R 25811413..25811555 214..356 190 75.5 Plus
Blast to na_te.dros performed on 2014-11-26 16:54:34 has no hits.

FMO10173.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:13:08 Download gff for FMO10173.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17770-RA 1..495 9..504 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:10:08 Download gff for FMO10173.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17770-RA 71..574 1..505 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:40:27 Download gff for FMO10173.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17770-RA 71..574 1..505 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:40:27 Download gff for FMO10173.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 25811981..25812484 1..505 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:10:08 Download gff for FMO10173.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21637703..21638206 1..505 98   Plus