FMO10173.5prime Sequence
518 bp (518 high quality bases) assembled on 2010-11-05
> FMO10173.5prime
CAGTCGACATGGATTTCGAATTCCTTACTCCGCCGCCAGAGGAACGGACC
ATTCGCACCCACAATCTGACCGAAGAACAGGTCAAGGATTTGGAGATTGC
CTTTTCCCTGTTTGACGACCAAGACACTAAGGTTATTCCTATAACAAATC
TCAGGCAACTAATGCTGTCTGTGGCCCACTATCCCAGTGATATGGAATTG
CAGGAAATTCAGGCCGAGATCGATGCTGATGGATCCGGTGAGTTATATCT
CAGCGATTTCCTTCACATCATGTCTCAGAGGTACGCAAACATGTCTACCG
AGGATGAAATTATAGCTGCATTCAGAGTCTTTGACAAAGAAGGAACCGGC
TTAATATCTGAATCGGAATTTCGTCACATAATGCAGAACATGGGGGAGCA
ATTGACGGATGATGAGGTGGAGGAGATCATCCGTGATGCAAATTCTTTTT
TGGAAGGCAATATAGACTATGTGCGATTTGTCAGAATGATGTCCACTACA
GCAAGCTTTCTAGACCAT
FMO10173.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acam-RB | 1224 | CG17769-RB | 78..570 | 8..500 | 2435 | 99.6 | Plus |
CG17770-RA | 1224 | CG17770-RA | 78..570 | 8..500 | 2435 | 99.6 | Plus |
CG5024-RB | 643 | CG5024-RB | 318..460 | 214..356 | 190 | 76.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25811988..25812480 | 8..500 | 2435 | 99.6 | Plus |
3R | 32079331 | 3R | 25811413..25811555 | 214..356 | 190 | 75.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:54:34 has no hits.
FMO10173.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:13:08 Download gff for
FMO10173.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17770-RA | 1..495 | 9..504 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:10:08 Download gff for
FMO10173.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17770-RA | 71..574 | 1..505 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:40:27 Download gff for
FMO10173.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17770-RA | 71..574 | 1..505 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:40:27 Download gff for
FMO10173.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25811981..25812484 | 1..505 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:10:08 Download gff for
FMO10173.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21637703..21638206 | 1..505 | 98 | | Plus |