FMO10176.5prime Sequence
1113 bp (1010 high quality bases) assembled on 2010-11-05
> FMO10176.5prime
CAGTCGACATGACGATAAAATCGTTCAACTTGGTGGTAAAGGGTCCCATG
TGGGGCGTTCGCCACCTGCAGGTACTGTTCCTCTTTCTGTGCGCCACCTT
GATCGTGGCCCAGAGGTTCAACATGAGCGTGGCCATTGTGGCCTTTACGA
ATGCCAATAGCAGCAACCCAAATTATCCGGAATACCGACTGACAGAGCCT
CAGAAGTCGTACACCATCAGCAGTCCCTTCTGGGGCTCCTGCTGCACCCA
GATGATGAGTGGATACCTATCGAGTCGCTTTGGAGCCAAGGTGCTGCTGC
TGACCATCATGTTGCTCACCGCTCTGCTCAGCATTGCCACGCCCTTCGCC
TTGGCCTGGGGCGGCTGGCAGCTGCTCTTCTGGGTGCGATTCGTCCAGGG
ACTCGCCATGGGCGGCATGTGGCCCTGCCTGTACACCCATCTGGCCAAGT
GGTGTCCCAAGAAGGAGGCCAATCGCATGGGCGGCATCATGACCACTGGC
TTGGATTGTGGGACAATAATGGGATTCGCTTTGAGTGGCGTACTCTCTGC
ATCGCCCCTCGGGTGGCCCAGCACATTCTACGTGCCAGGATACTTAGGCA
TCGTGTGGTGCCTTACTTTCTTGCGATATGGCGCCAACAGCCCATCCGAA
TCGAAATTCATTTCTCTGGCGGAACGAAAGCACATTCAATTTGCCCTCGA
GCAGAATCAGGTGATTCGCGGTGCAACTCCTCCAGTACCGTGGCTCCAGA
TCCTCACCTCTCGTCCATTTATCGTCCTGGCGTTTTGCAAAATGAGCCAG
GCGTGCAGCTTCTACACGCTGATGCAACAGATTCCGCGCTACATCCACGG
TATATTCCACTACAGCATTGCGGCAAATGCCCTGCTCTCAGCTCTGCCCT
TTGTGGTCATGCTGATGTCATCCTACGGATTCATTTTCCTGGCTGAATAC
CTAACCCGGTCGTCGAGACATTTCATTGCCTATCCTACGGAAGAACATTA
ATTCCTTGGCCGCATGACCCCTGCTGTAGCCTGGTAATCTTATCCTACGT
CACGATCAGATGTGGTGGGCAGATGTTTTTGCTGGATGCACCACACTGCC
ATTTCGACAGCCA
FMO10176.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3649-RB | 1569 | CG3649-RB | 41..1143 | 9..1105 | 5185 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22846112..22846659 | 42..589 | 2740 | 100 | Plus |
2R | 25286936 | 2R | 22846910..22847399 | 586..1072 | 2130 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:54:40 has no hits.
FMO10176.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:13:09 Download gff for
FMO10176.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3649-RA | 1..1047 | 48..1090 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:10:12 Download gff for
FMO10176.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3649-RB | 34..1126 | 1..1090 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:40:30 Download gff for
FMO10176.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3649-RB | 34..1126 | 1..1090 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:40:30 Download gff for
FMO10176.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22846113..22846658 | 43..588 | 100 | -> | Plus |
2R | 22846913..22847418 | 589..1090 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:10:12 Download gff for
FMO10176.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18733636..18734181 | 43..588 | 100 | -> | Plus |
arm_2R | 18734436..18734941 | 589..1090 | 97 | | Plus |