FMO10187.5prime Sequence
1126 bp (966 high quality bases) assembled on 2010-11-05
> FMO10187.5prime
CAGTCGACATGGGAATTTTGGGCTTATCTAAGCTCATTGCCGATCTGGCG
CCACAGGCGATTCGCGAAAGTGAGATGAAGCATTTTTTCGGTCGCAAGGT
AGCAATCGATGCTAGTATGTGCCTGTACCAGTTCCTCATCGCCGTGCGCT
CCGAAGGCGCCCAGTTGGCCACCGTAAATGGTGATCCCACGTCCCACTTA
ATGGGCATGTTCTACCGCACCATCCGATTGCTGGACAACGGAATCAAGCC
GGTATATGTCTTCGACGGAAAGCCACCAGATCTCAAGTCCGGTGAGCTGG
CGAAGCGCGCCGAGCGGCGGGAGGAAGCGGAGAAGGCACTGAAGGCGGCC
ACCGATGCGGGAGATGATGCCGGTATCGAAAAGTTTAATCGCCGATTGGT
CCGGGTAACGAAGGAGCACGCCAAAGAGGCCAAGGAACTGCTCATATTAA
TGGGTGTGCCCTATGTTGATGCACCGTGCGAAGCGGAGGCCCAGTGTGCC
GCTCTGGTGAAAGCTGGAAAGGTTTATGCCACCGCCACGGAGGATATGGA
TGCCCTCACATTCGGATCTACAAAACTGTTGAGATACCTTACCTACAGCG
AGGCACGAAAGATGCCCGTCAAGGAGTTCAGCTACGACAAGCTGTTGGAA
GGTCTGGCCATTAACAATCGAGAGTTCATTGATCTATGTATTCTGCTGGG
TTGCGATTACTGTGAGAGCATCAAAGGGTATTGGACCCAAGCGAGCGATC
GAACTGATCAACACCTATCGGGATATAGAGACTATTCTGGATAACCTGGA
CTCTAGCAATACACCGTGCCCGAGAACTGGAACTACAAGGTGGCGCGGGA
CTCTTCATCGAACCGGAGGTAGCTGATGCCGACTCCATAGATCTCAATGG
GTCGAGCCGGATGAGAAGGCCCTTGTCAAGTTTCTCTGCGGCGACCGGCA
GTCAACGAAGAGCGCGTCTGCAACGGTGGCCAAAAGCTGATGAAATCCAA
GCAAGCCCAAACCTCAGTGAAGACTGAATAGCTTCTTTAAAAACCTGCCC
AGCACTTCAATGCCCTACGCTGCAAACGGAAGGCCAAGAAGCTAAGAAAA
GCTCCAATATACAAAAAGGCCAAAGA
FMO10187.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fen1-RA | 1378 | CG8648-RA | 122..1247 | 4..1123 | 4970 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16854227..16855195 | 1056..90 | 4285 | 97.5 | Minus |
| 2R | 25286936 | 2R | 16855255..16855343 | 92..4 | 430 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:55:10 has no hits.
FMO10187.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:13:14 Download gff for
FMO10187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fen1-RA | 1..1122 | 9..1125 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:10:31 Download gff for
FMO10187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fen1-RA | 119..1248 | 1..1125 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:40:47 Download gff for
FMO10187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fen1-RA | 119..1248 | 1..1125 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:40:47 Download gff for
FMO10187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16854155..16855194 | 91..1125 | 96 | <- | Minus |
| 2R | 16855257..16855344 | 1..90 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:10:31 Download gff for
FMO10187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12741660..12742699 | 91..1125 | 96 | <- | Minus |
| arm_2R | 12742762..12742849 | 1..90 | 96 | | Minus |
