FMO10188.5prime Sequence
431 bp (431 high quality bases) assembled on 2010-11-05
> FMO10188.5prime
CAGTCGACATGGGTTTTCACATGGGACGACAGCTGCTACTCTCCGGATTC
CTGCTGGTGATGCTTCAGATGGTGACCCAAACGCAGGCCAGGCCGCAGGA
TGTGATCACAGTTGCTGGCGAGGAGACAGAGGTGGTGATCAAGCGGGAGG
GCGATGACGATGGAGACGACGATGACTCCTCCTCCGAGGAAACAGTCGAG
GATTCCGAGGAAAGCAGACGCAGACGACGCGAGGTGAATACGGACAACAC
GCCATCGGCTCGAGCGGTTATTCCAGGCGAGCAAGTAGTCCCCATTCTCT
TGGAGGCCATTCTTCCCAGCGTGGATGCAGCGGGCGATCGCTTCGCAAGA
TCTGTGCAATTTCTGAAAAACTTGACCCCTGGCTCTGAATTGTTTGCCGT
CGAGAAGAACGAAGCAAGCTTTCTAGACCAT
FMO10188.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Os-C-RC | 550 | CG3250-RC | 17..421 | 9..413 | 2025 | 100 | Plus |
Os-C-RD | 538 | CG3250-RD | 17..409 | 9..413 | 1835 | 97 | Plus |
Os-C-RB | 604 | CG3250-RB | 17..285 | 9..277 | 1345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7979114..7979295 | 96..277 | 910 | 100 | Plus |
3R | 32079331 | 3R | 7979347..7979485 | 275..413 | 695 | 100 | Plus |
3R | 32079331 | 3R | 7978975..7979065 | 9..99 | 455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:55:13 has no hits.
FMO10188.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:13:15 Download gff for
FMO10188.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Os-C-RC | 17..425 | 9..419 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:10:33 Download gff for
FMO10188.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Os-C-RC | 17..425 | 9..419 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:40:49 Download gff for
FMO10188.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Os-C-RC | 17..425 | 9..419 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:40:49 Download gff for
FMO10188.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7978975..7979064 | 9..98 | 100 | -> | Plus |
3R | 7979117..7979294 | 99..276 | 100 | -> | Plus |
3R | 7979349..7979489 | 277..419 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:10:33 Download gff for
FMO10188.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3804697..3804786 | 9..98 | 100 | -> | Plus |
arm_3R | 3804839..3805016 | 99..276 | 100 | -> | Plus |
arm_3R | 3805071..3805211 | 277..419 | 97 | | Plus |