FMO10189.5prime Sequence
260 bp (260 high quality bases) assembled on 2010-11-05
> FMO10189.5prime
CAGTCGACATGCGTTTATATAAAATATTCTGCCTAATTTGTTCCATATTT
GGCTGTGTTTCAGCTTTAAAAGATCCGAGCTGTGCTGTTGAGTTGTTTGG
CCAAGGTGCTTGCAACACTTTGATTACTCGAATCGGCTATTTACGTTGGG
AAAACATGTGTACATCAAAGAACTTTGTTGCATGCGACACCGATGGAACT
TCATTTGAGAGCATTAAGGAATGCGAAGATAAATGCAAAGAGGCAAGCTT
TCTAGACCAT
FMO10189.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp23F-RA | 322 | CG42459-RA | 36..269 | 9..242 | 1155 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3387407..3387573 | 242..76 | 835 | 100 | Minus |
| 2L | 23513712 | 2L | 3387642..3387708 | 75..9 | 320 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:55:17 has no hits.
FMO10189.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:13:15 Download gff for
FMO10189.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp23F-RA | 36..276 | 9..250 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:10:35 Download gff for
FMO10189.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp23F-RA | 36..276 | 9..250 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:40:51 Download gff for
FMO10189.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp23F-RA | 36..276 | 9..250 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:40:51 Download gff for
FMO10189.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3387400..3387573 | 76..250 | 97 | <- | Minus |
| 2L | 3387642..3387708 | 9..75 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:10:35 Download gff for
FMO10189.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3387400..3387573 | 76..250 | 97 | <- | Minus |
| arm_2L | 3387642..3387708 | 9..75 | 98 | | Minus |
